Purpureocillium takamizusanense: JDV02_006092
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Entry
JDV02_006092 CDS
T08929
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03022
Basal transcription factors
ptkz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JDV02_006092
09124 Replication and repair
03420 Nucleotide excision repair
JDV02_006092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptkz03021
]
JDV02_006092
03400 DNA repair and recombination proteins [BR:
ptkz03400
]
JDV02_006092
Transcription machinery [BR:
ptkz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JDV02_006092
DNA repair and recombination proteins [BR:
ptkz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JDV02_006092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Motif
Other DBs
NCBI-GeneID:
72068041
NCBI-ProteinID:
XP_047843431
LinkDB
All DBs
Position
5:join(1662156..1662757,1662837..1663674)
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AA seq
479 aa
AA seq
DB search
MADSDGEFVADGMSDDDLVEHNVSDDDVETTGRPSRGGSKPSRLRRRKGDRGSQRAWEQS
KRSWETNLPEEDQNGVLNLTALEAEKRKRLLRDTTPLQRGIIRHVVLVLDMSFAMAEKDL
LPTRYRLTLSYAAAFVREFFEQNPISQLGIVGMRDGVAVRISDLGGNPAEHLEKLKEMEG
QDPQGNPSLQNALEMCRGALFHAPSHGTREVLIIYGALLSSDPGDIHETISNLITDRIRV
SIVGLSAQVAICADLCSRTNAGDDSQYNIAMDEVHFRDLFLAATTPPVTRTQEQSTASLL
MMGFPSRTLAPGGSTSYCACHNKPCREGYACTRCSTRVCRLPAECPACNLTLILSTHLAR
SYHHLFPLRNWVEVSWADATRSTVCFSCQCPFPDATRGASTHLQASKNKEDVAKTTAKGV
SESGRYACEVCGNHFCIDCDVFAHEVIHNCPGCQSNVQRDHEAAAGVNGRANGAMEVDS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcagactccgatggcgagttcgtcgccgacggcatgtcggacgacgacctcgtggag
cacaacgtcagcgacgatgacgtcgagaccacgggccgcccctcgcgagggggcagcaag
ccctctcgattgcggcggcggaagggcgaccgcggctcccagcgagcctgggagcagtcg
aagcgctcgtgggagacgaacctgcccgaggaggaccagaacggcgtgctcaacctgacg
gccctcgaggccgagaagcgcaagcgcctgctgcgcgacacgacgcccctgcagcggggc
atcataagacacgtggtgctcgtgctggacatgtcctttgccatggcggaaaaggacctc
ctgccgacgcgctatcggctgacgctgagctacgccgcggcgtttgtccgggagttcttc
gagcagaaccccatatcgcagctcggcatcgtgggcatgcgagacggcgtggcggtgagg
ataagcgacctcgggggcaaccctgcggagcacctcgagaagctcaaggagatggagggg
caggatccccaggggaacccgagcttgcagaatgcgctggagatgtgtcgaggcgccttg
tttcacgcgccgtcgcatggcacacgagaggtgctcatcatctacggcgctttgctttcg
agcgacccgggcgacatccacgagacgatcagcaatctcatcaccgaccggatacgcgtg
tccatcgtcggcctgtcggcgcaagtggccatctgcgccgacctatgctcgcggaccaat
gccggcgatgactcgcagtacaacatcgccatggacgaggtacatttcagggacctgttc
ctcgccgccacgacaccgccggtcacgcggacgcaggagcagagcaccgccagcctgctg
atgatggggttcccgtcgcggacgctcgccccgggcggcagcacgagctactgcgcgtgc
cacaacaagccctgccgggagggctacgcctgcacgcggtgctcgacgagggtgtgcaga
ctgccggccgagtgcccggcctgcaacctgactctcatcctgtcaacccatctcgcgcgc
tcgtaccaccacctcttcccgctgcgcaactgggtggaggtgtcctgggcggacgccacc
cgatcgaccgtgtgcttttcgtgccagtgcccgttccccgacgccactcgcggggcatcc
acacacttacaggcgagcaagaacaaggaggatgtcgccaagacgacggccaagggcgtc
agcgagagcggccgctacgcgtgcgaagtgtgcgggaaccacttttgcatcgactgcgat
gtctttgcgcacgaagtcatacacaactgccccgggtgtcaaagcaacgtgcagcgggat
cacgaggcggccgccggggtgaacggacgcgccaacggcgccatggaggtggattcatga
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