Purpureocillium takamizusanense: JDV02_009151
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Entry
JDV02_009151 CDS
T08929
Symbol
RPD3
Name
(RefSeq) Histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03082
ATP-dependent chromatin remodeling
ptkz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
JDV02_009151 (RPD3)
03083 Polycomb repressive complex
JDV02_009151 (RPD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptkz03036
]
JDV02_009151 (RPD3)
Enzymes [BR:
ptkz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
JDV02_009151 (RPD3)
Chromosome and associated proteins [BR:
ptkz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
JDV02_009151 (RPD3)
HDAC complexes
Sin3A-HDAC complex
JDV02_009151 (RPD3)
BRAF-HDAC complex
JDV02_009151 (RPD3)
REST complex
JDV02_009151 (RPD3)
SHIP complex
JDV02_009151 (RPD3)
MiDAC complex
JDV02_009151 (RPD3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
JDV02_009151 (RPD3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
JDV02_009151 (RPD3)
Chromatin remodeling factors
NuRD complex
JDV02_009151 (RPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
72071096
NCBI-ProteinID:
XP_047846802
LinkDB
All DBs
Position
9:join(1023775..1024299,1024354..1024654,1024719..1025260,1025310..1026227)
Genome browser
AA seq
761 aa
AA seq
DB search
MDERANNGANRRSHCTLAQSSCQPRRPNFIPPPASRVVPFSRPSSSPSRAAAALSLCDNI
GTLCDALFEPSFGTSFDKHPNTPRHYHHTLRRSEADSRSAFLEIAAKAMGEGDSNMASLG
SVALNGSSPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPA
TRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSME
GAARLNRQKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGQGKHYAVNFPLRDGITDESYKS
IFEPVIENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLG
GGGYTMRNVARTWAYETGVLVGQDMERTLPYNEYYEYYAPDFELNVRSSNMENSNSREYL
EKITAAVIDNLRQTGPAPSVQMQDVPRKPFGGMTDEEEAELDDLDEDENKDVRMTEHRWD
KNVTNDAEFEASDDEDMASANGATRRNGNKRTFTDFRKGEADVEGETTTPRSRKDGDADK
EPSEEEVHDVNDDTIEDVGATEESEKTETVQAEAPKEPEKQNVDDDGDVGMTDSAPADET
AVKKEEVEPEPAPEAEAADKPAEEKRDESEAPKGETRATAEPESTEEKKAAEPVKEAEPE
KCADKDTAKEDEAPAAEPMEVDQDKEEPKKPSEGPADSATS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgggcgaacaatggcgccaataggcgctcccactgcaccctcgcgcagtcg
tcctgccagcctcgccgccccaactttattccgccgccagcgagccgcgtcgtgccgttc
tctcgcccttcttcatcaccatctcgcgccgcggccgcactctcactctgcgacaacatc
ggcacgctatgcgacgcgctctttgagccttcgtttggaacatctttcgacaagcatcct
aacactcctcgccactaccaccacaccttgcgccgaagcgaggccgactcccgatctgcg
ttcctcgaaattgcagccaaagccatgggcgaaggcgattccaacatggccagcctgggc
tccgtcgccctcaatggctcctcgcccaagaaggtcgcatacttttacgactccgacatt
ggcaactacgcctacgtcacgggccaccccatgaagcctcaccgcattcgcctggcgcac
agcctgatcatgcagtacaacctctaccagaagatggagatttaccgcgcgaaacctgcc
actcgtggcgagatgacgcagttccacacggacgactacatcgattttctccaaaaggtc
accccagacaacatggacagctacatgcgcgagcagggcaagtacaacgtgggcgacgac
tgtcccgtgttcgacggcctcttcgagttttgcggcatcagcgccggcggcagcatggaa
ggcgccgctcgcctgaaccgtcaaaagtgcgacattgccgtcaactgggctggtggactc
catcacgctaagaagtgcgaggccagcggcttctgctacgtcaatgacattgtcctcggt
atcctcgaactgcttcgcttcatgaagcgcgttctctacatcgacatcgatgtgcaccac
ggcgatggcgtcgaggaagccttttacacgaccgatcgcgtcatgaccgtctcgttccac
aagtacggcgagtatttccctggaactggcgaacttagggacattggcattggccagggc
aagcactacgcggtcaatttccctctccgcgacggcatcacggacgagtcctacaagtca
atattcgagcccgtcatcgagaacgtcatgaagtactatcagcccgaggcggttgttctt
cagtgcggaggcgacagtctgtctggagaccgattgggatgcttcaacctgagcatggac
gggcacgccaactgcgtcaactatgtcaagagcttcggcctgcccactctcgtccttggt
ggcggcggctatactatgaggaatgtcgcccgcacctgggcctacgagactggagtcctc
gtcggtcaagacatggagcgtactctgccatataacgaatactatgagtactacgccccc
gactttgagctgaatgtcaggtcgtcaaacatggaaaattcgaacagcagggagtacctc
gagaagatcacggcagccgtcatcgacaacctccgccagactggcccggcaccgtcggtg
cagatgcaggatgtccctcgcaagccgtttggcggtatgacggacgaagaggaagccgag
ctcgatgatctcgacgaggatgagaacaaagacgttcgaatgacggaacaccgttgggac
aagaacgtcacaaatgatgccgaattcgaggcgagcgatgacgaagacatggccagcgcc
aacggcgcgacgcgtcggaatggcaacaagcgcaccttcactgacttccgtaagggagaa
gccgatgtcgagggcgagaccaccactccccgaagccgcaaggatggggacgccgacaag
gagccgtcggaggaagaggtccacgacgtcaacgacgacacaattgaagatgtcggcgcc
accgaggaatctgaaaagacggaaaccgttcaggcagaggcgcccaaagagccggaaaag
caaaacgttgacgatgatggcgacgtgggcatgacagactccgcccccgccgacgagaca
gccgtcaagaaggaagaggttgagcccgagccggcaccagaagctgaagcggctgataaa
cccgccgaggagaagcgcgatgagtcagaggcaccgaagggggagacccgagcaacggct
gagccagagagcactgaggagaagaaggccgccgagccggtcaaggaggctgagcccgag
aaatgcgctgacaaggacactgccaaagaggacgaggctccggctgccgagcccatggaa
gttgaccaagacaaggaggagcccaagaagcccagcgaggggcccgctgatagcgcgacg
agctag
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