Purpureocillium takamizusanense: JDV02_010844
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Entry
JDV02_010844 CDS
T08929
Symbol
NAM7
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03013
Nucleocytoplasmic transport
ptkz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
JDV02_010844 (NAM7)
03015 mRNA surveillance pathway
JDV02_010844 (NAM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_010844 (NAM7)
Enzymes [BR:
ptkz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JDV02_010844 (NAM7)
5.6.2.5 RNA 5'-3' helicase
JDV02_010844 (NAM7)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
JDV02_010844 (NAM7)
mRNA cycle factors
Common to processing body (P body) and stress granule
JDV02_010844 (NAM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
UvrD-helicase
SLFN-g3_helicase
Viral_helicase1
PIF1
Helicase_RecD
ATPase
nSTAND3
AAA_22
Ribosomal_S13_N
SRP54
PhoH
AAA_10
AAA_16
Motif
Other DBs
NCBI-GeneID:
72072761
NCBI-ProteinID:
XP_047839324
LinkDB
All DBs
Position
2:complement(join(1712114..1715081,1715138..1715427))
Genome browser
AA seq
1085 aa
AA seq
DB search
MEGAFTHVGNHLISDSAAAINAGADDLSALDPDESLLYGQYGAGPSSRRRADDDDNQTEA
FEDDDNDSLNSVPVDGMMGLKLKNAEEEKQLPPHACAYCGIHSPACVVKCLTCNKWFCSA
RGNGTSTHIVNHLVRARHKEVQLHPESALGDTVLECYNCGTKNAFLLGFIPAKSDTVVVL
LCRQPCAANSSNKDMNWDVSRWEPLIEERAFLPWLVAAPSDAEQLRARHLSPNTIAKMEE
MWKINANATLMDLEKASNMDEDPDPVLLRYEDPYHYQNVFGPLVKMESDYDKKLKEAQSE
DGLIVRWDYGLNNKHLVSFNLQKIESGDVKLAVGDEMRLRYNGELRDPWEGVGYVIKIPN
SQSDEVCLELRKAGNDKLVPTDLSHNFSADYVWKATSYDRMQLAMKNFAIDDMTVSGYLF
HVLLGRDVQLQPMKATQPKKWSAPGLPDLNQSQVDAIKSVLQKPISLIQGPPGTGKTVTS
ATIIYHLAMTTKNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALH
EQVRMAEHNTELVKLSQLKNDVGELSSQDEKKFKQLTKLAEREILQNADVVCCTCVGAGD
PRLSKMKFRNVLIDESTQSAEPECLIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQ
SLFERLINLQLSPIRLTTQYRMHPCLSEFPSNMFYDGALQNGVTHEQRIRKDVDFPWPVA
EMPMMFWSNLGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGVITPYEGQRSY
VVTTMQNSGQYKKELYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVA
LTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSYRQ
KNNYQSQFGAGGYANGRHNGAPPGRDFNDAGSMMSYIPDDVSSIQGSAFGGANLNSAFPP
MFSSFTPEHWPGLPGVPAPGRGGKSRGRATESIAGESVANSELTDATSSILGGKGVGQGG
VSLGAGLHDAVTGMRPVSYTQSDRLKQYVESNGRMAPGSGYGRRYDDDEKSVSTAFHSQI
GGGYD
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccttcacacacgtgggcaaccacctcatttccgactcagctgctgccatc
aacgccggggccgacgatctttctgcgctcgaccccgacgagagcctgctctacggccag
tatggagctggccccagcagccgacgacgagccgacgacgacgacaaccaaaccgaagca
ttcgaggacgatgacaatgatagtctcaacagcgtccccgtggatggcatgatgggtctg
aaactgaagaatgccgaagaggagaagcagctccccccgcacgcgtgcgcgtactgcggt
attcactctccagcctgcgtcgtcaagtgtttgacttgcaacaagtggttctgcagcgct
cggggcaacggcacttccacccatatcgtcaaccacctcgtgcgagcgagacacaaggaa
gtgcagctacatcccgagtcggctcttggggacacggttctggaatgctacaactgcgga
accaagaatgccttcttgcttggcttcatcccggccaagtctgataccgtcgtcgttctg
ttgtgccgccaaccttgcgccgcaaactcctcgaacaaggatatgaactgggacgtgtcg
cgctgggaacccctgattgaggaacgagcgtttctgccctggctcgtcgcggccccctcc
gacgcggagcagcttcgggctcgtcacctgtcgccaaacacgatcgccaagatggaggag
atgtggaagatcaacgcgaacgcgaccctgatggaccttgagaaggcgtccaacatggac
gaagaccccgatcccgtgcttcttcgctacgaagatccgtaccattatcaaaacgtcttt
gggcctctcgttaaaatggagtctgactacgacaagaagctcaaggaggcgcagtcagag
gacggtctcattgtacgctgggactatggtctcaacaacaagcatctcgtcagcttcaac
ttgcagaagattgagtcgggcgacgtcaagcttgctgttggcgacgaaatgaggcttcga
tacaacggcgagctgcgcgatccttgggagggtgtcggctatgtcatcaagatccccaac
agccagtccgatgaggtctgcctggagctgcgcaaggccggaaatgacaagctggtcccg
accgatctctcgcacaacttctcggccgactatgtttggaaggcgacttcttacgaccgg
atgcagcttgcaatgaagaatttcgccattgacgacatgaccgtgtcgggctacctcttc
catgttctgctcggccgcgacgttcagctgcagccgatgaaagcgacccaacctaagaag
tggtctgctcctgggcttcctgatctcaaccagagccaggtggatgccatcaagtcggtg
ttgcagaagcccatcagcctcatccaaggtcctccaggcacgggcaagacggttacgtca
gcaaccatcatctatcacctggccatgacgacaaagaaccaagtactcgtctgcgccccg
tccaacgtcgctgtcgatcagctttgtgagcgcattcaccgcaccggtctgaaggtagtc
cgcttgacggcgaagtctcgcgaggacgtcgagtcgtccgtcagcttcctggcgttgcac
gagcaagttcgcatggcggagcacaacacggaactcgttaagctgtcgcagctcaagaac
gacgtcggcgagctgtccagccaggacgagaaaaagttcaagcaactgacgaagcttgcg
gagcgcgaaattctccaaaacgccgacgttgtgtgttgcacgtgtgtcggcgcgggtgac
cctcgtctctccaagatgaagttccgcaacgttctcatcgacgagtccacgcaatctgcc
gagccagaatgcctgatcccactcgttctaggctgcaagcaagtcgttctcgttggcgac
cacaagcagctaggccccgtcatcatgaacaagaaggccgccaaggcgggcctgaaccag
tccctgtttgagcgcctcattaacctccagctttcgccaatccgactcacgacgcaatac
cgaatgcatccttgcctctccgagttcccatccaacatgttctacgacggagccctgcag
aacggcgttacgcacgagcaacgtatccgaaaagatgtggacttcccctggcccgtggca
gagatgcccatgatgttctggtccaacctgggacatgaggaaatctcgacatcggggacc
tcgtatcttaatcgcacggaagcttccaacgtggagaagaccgttacccgattctttaaa
gcgggtgtcaagcctagcgagattggtgtcatcacgccgtacgagggtcaacggagttac
gttgtgacaaccatgcagaattctgggcagtacaagaaggagctttacaaggaggtcgaa
gtcgcctccgtcgatgccttccaggggcgagagaaggatttcattgttttgtcttgtgtc
cgatcgaacgagaaccagggcattggcttcttgtccgatcctcgtcgcctcaacgtggct
ttgacccgtgccaagtacggtctggtcatcttgggaaaccccaaggttttgtccaagcat
gaactttggcacaacctgctggtccacttcaaagatcgcaagtgctttgtcgaaggccca
ttgaccaacctgcaggcctgcttgctgcaattcagccgacccaaggtcagctatcggcaa
aagaacaactaccagtcccaattcggggccggaggctatgccaacggacgacacaacggc
gcgccaccaggccgcgacttcaatgatgccggctccatgatgtcctatatccccgacgac
gtgtcgtcgatccagggctccgcgttcggcggcgccaacttgaactcggcattcccgccc
atgttttccagcttcacgccggaacactggccggggcttcctggggtgcccgctccaggt
cggggcggcaagagccgcggccgggcgacggagagcattgccggggagagtgttgcaaac
tcggagctgacggatgcgacatcgagcatcttgggcggcaagggtgttggacagggcggc
gttagcctcggcgccgggctccacgatgccgtgacaggaatgcggccggtgtcatacacg
cagagcgaccgcttgaagcagtacgtcgaaagcaatgggcgcatggcacccggaagcggg
tacggacgccgatacgacgacgatgaaaagagcgtcagcacagcgtttcacagccagatt
ggcggcggctacgactga
DBGET
integrated database retrieval system
