Paramecium tetraurelia: GSPATT00006626001
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Entry
GSPATT00006626001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00006626001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00006626001
Spliceosome [BR:
ptm03041
]
Common components
Common spliceosomal components
SR proteins
GSPATT00006626001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_3
zf-CCHC_2
Nup35_RRM_2
SET_assoc
DbpA
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5020502
NCBI-ProteinID:
XP_001434717
Genoscope:
GSPATT00006626001
UniProt:
A0C953
LinkDB
All DBs
Position
undetermined
AA seq
191 aa
AA seq
DB search
MGDIIPNQLFVAGYSRSKVQDEKDVRDIFKKYGAIKEVAYKGSYSFVTFSNEQEAQEALK
STNGQTYNGQKLKVDVVDNRKGRKTGPNEEDKCFKCNKGGHWARNCPNIKSPRRSRRRSD
SRSKRRHRRSESRSYSSYSSSRSRRRRYQNKRKRHSRSPRRDQRIRKRSVSPKRSPSDSA
SSKRPNSNSKS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatattatccctaattaactatttgttgctgggtacagccgtagcaaggtatag
gatgagaaggacgtgagagatatcttcaaaaagtacggagctatcaaagaagttgcgtac
aagggatcttattcatttgttaccttcagtaatgagtaggaagcacaagaggctttgaag
agtaccaacgggtaaacttacaatggccaaaaattgaaagtggatgtggttgacaatcgt
aaaggaaggaagacaggtccaaatgaggaagataaatgtttcaaatgcaataaaggtggt
cattgggctcgtaattgtcccaatatcaaatcacctagacgtagtaggagaagatccgat
tcgagatcaaagcgccgtcacagaagatctgaatcaagatcatattcttcttattcatca
tccagatctagaagaagaagatatcaaaacaaaagaaagagacacagcagaagccctaga
agagatcaaaggatcagaaaaagaagtgttagtccaaagagatcaccttctgattcagcc
tcatccaaaagaccgaattcaaactcaaaatcttga
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