Paramecium tetraurelia: GSPATT00011901001
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Entry
GSPATT00011901001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03013
Nucleocytoplasmic transport
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00011901001
09122 Translation
03013 Nucleocytoplasmic transport
GSPATT00011901001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00011901001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00011901001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GSPATT00011901001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
EJC/TREX
GSPATT00011901001
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GSPATT00011901001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
DUF4834
Motif
Other DBs
NCBI-GeneID:
5029510
NCBI-ProteinID:
XP_001443725
Genoscope:
GSPATT00011901001
UniProt:
A0CZW1
LinkDB
All DBs
Position
undetermined
AA seq
557 aa
AA seq
DB search
MSEFKQMEIESYILNFKARHTEIIKQKLQKLHEEESADQLQPFYQAFLKNCRDYLHQKLK
LTCKKVLDEDLLELLKVNIFLAELSYSISKEVPELKSYPLTFSEDIYECLSLSELYDYFN
NLYSQISTISKFQDENKYVLLRICNSMLKRLSTTHDTFLRGQVQIFLTQIFSTIHPSLRK
KPINIRDRGFDEESVKVNASLPYSFYKNFWTLQKYLNNSELIFKNKVEFDDIGEEAGQVT
QGVSEPQRTKNLQAVIKVIMRALQYFKENPLEPEIITVKRFPKFLTKYSLFKNQLNDPYF
RKLFLNQVLLFIFVAELENHEKQFIQNLKIEVQKQLDELGDKLGEKVQHLIDTERTWRLW
VTEKQCFDDGYEKLSIKASEKAKKKRQEIQKRIYDDLKYKQTDTFQQILQDQGRPYKIET
NPIEPGLNYYLNEVFYQLDQNRKIADNERCKNLKDYAWKSVRVISKFLLKELKITNLITQ
ELKPLPNLEDIVENLKNAGNEMTAERQQQSNNNNNNQNNNNNNNNNNNNNNTNNNNNNNN
PVTIKPVHINQQISNQK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatttaaacaaatggagattgaatcgtacattttaaatttcaaagcgagacac
actgaaataataaagcaaaaactgtaaaagctgcatgaggaagaatctgcggattaattg
taaccattttattaagctttcctaaagaactgtagagactatttgcatcaaaaattgaaa
ttgacttgtaaaaaggttctagatgaagacctattagaacttttaaaagtaaatattttt
ttggcagaattatcttattcaataagcaaggaagtcccagagctcaagtcctatcctctt
acttttagtgaagatatctatgaatgtttgtctctttcggaactttacgattactttaac
aatttatatagttagatatccacaatatcgaaattccaagacgagaacaaatatgtttta
ctgagaatttgcaattcgatgctcaaacgactgtcaacaacccatgacacttttttgaga
ggataagtttaaatattcttgacccaaatattctcaacaatacatccatccttgaggaag
aagccaatcaatataagggatagaggatttgatgaagaatcagtcaaagtgaatgcctca
ttgccgtattccttttataaaaatttttggactttacaaaaatatctaaataattctgaa
ttaatattcaaaaacaaagtggagtttgatgacattggcgaagaagctggataagtaact
caaggagtctctgaacctcaaagaacaaaaaacctgtaggctgtgataaaagtcataatg
agagctttgcaatatttcaaagaaaatcctttagaacctgaaatcataacagtgaaaaga
tttcctaaattccttacaaaatattctttattcaagaattaattaaatgatccttacttt
agaaagttgttcttgaattaagttttattgtttatttttgtagctgaacttgagaatcat
gaaaaataattcatatagaatttgaaaattgaagtacaaaaataattagatgaattagga
gataaattaggagagaaggttcaacatttaattgatacagaacgaacttggcgactttgg
gtgacagaaaaacaatgctttgatgatggctatgaaaaactaagtattaaagcctctgag
aaagcaaaaaagaaaagataagaaatacagaagcgaatttatgatgacctcaaatataaa
tagacagacacattttaacaaattttacaagattaaggaagaccttacaaaatagaaact
aatcctattgaaccagggttaaattattatttaaatgaagtgttttattaattagatcag
aatcgtaaaattgctgacaatgaaagatgtaagaatttgaaggattatgcttggaaatca
gttagagttatctccaaatttcttttgaaagaattaaaaattactaatctaattacttag
gaattgaaaccattacctaatctggaagacattgtagaaaacttgaagaatgctggaaat
gaaatgacagcagaaagataataataatctaataataataacaataattaaaataataac
aataataataataataataacaataataataacactaacaataataacaataataataat
cctgttacaatcaaacctgttcacataaattaataaatatcaaactagaagtga
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