KEGG   Paramecium tetraurelia: GSPATT00020572001
Entry
GSPATT00020572001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00020572001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00020572001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GSPATT00020572001
 Complex B
    GSPATT00020572001
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    GSPATT00020572001
SSDB
Motif
Pfam: TUDOR Tudor_2 SMN_Tudor
Other DBs
NCBI-GeneID: 5040092
NCBI-ProteinID: XP_001454307
Genoscope: GSPATT00020572001
UniProt: A0DV43
LinkDB
Position
undetermined
AA seq 310 aa
MSEPYKKQKIDSFDYYDPPENYQPPVQQLDQSKVIEGYKTLIMLKNHMFKVNLLLSHEEE
SSTIAELKNIKDELVLAKEAQEKEIASLQKTQDNLFSVNRLNGEDIDKLAKAYHEQDRKW
YNAKLIQIDTEEQEADIQFIGYQEVVKMHAIFIKVQPIPDSKLFTVGQQCEAIYSSDGRY
YLGTIEKVTEEGYHIRFKKNSNREIVPLIYLREAKKQLNDSKKMNFEEMDEFQVPENLKY
LPTDNEQQRQAKKKKIKAMKQTFKLSKITKYAQEKQSSWQSFSQKVSTIKPDLGQKAESI
YRQKCDQLKE
NT seq 933 nt   +upstreamnt  +downstreamnt
atgtctgaaccctataaaaaataaaagatagactcatttgattattatgacccaccagag
aattaccagcctcctgtacaacaattggattagagtaaggtgattgaaggatataaaact
ttgattatgctgaaaaaccatatgtttaaagtgaatctattgctatctcatgaggaagag
agttcaacaatagcagaattaaaaaatatcaaggatgaattggtattagctaaggaagca
caagagaaggaaatcgcatctttatagaaaacacaggacaatttatttagtgttaataga
ctcaatggtgaggatattgataaattggctaaggcataccatgaataggataggaaatgg
tataatgcaaagcttatttaaattgatactgaagaataagaagcagacatccaatttatt
gggtattaggaagtcgtgaaaatgcatgccatttttattaaagttcaacctattccggat
agtaaattatttacagtgggataataatgtgaagcaatatactcttcagacgggcgttat
tatttgggaacaattgaaaaagtaacagaagaagggtatcacataagatttaagaaaaat
tcaaatagagaaattgtgcctttgatttatttaagggaagctaagaagtagttgaatgat
tctaaaaaaatgaattttgaagaaatggatgaattttaggtacctgaaaatttaaaatat
ctgcctactgataatgaataatagagataagcaaaaaagaagaaaatcaaggcaatgaaa
caaacatttaagttgtctaaaattactaaatatgctcaagagaaataatcatcttggcag
tctttcagctagaaggtttcaactatcaaaccagatctaggtcagaaggcagaaagcatt
tatagacaaaaatgtgattagttgaaggaatga

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