KEGG   Paramecium tetraurelia: GSPATT00025558001
Entry
GSPATT00025558001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00025558001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00025558001
Spliceosome [BR:ptm03041]
 Common components
  Common spliceosomal components
   SR proteins
    GSPATT00025558001
SSDB
Motif
Pfam: RRM_1 zf-CCHC zf-CCHC_2 zf-CCHC_4 zf-CCHC_3 RRM_3 zf-CCHC_5 RNA_bind RRM_occluded DbpA
Other DBs
NCBI-GeneID: 5046004
NCBI-ProteinID: XP_001460219
Genoscope: GSPATT00025558001
UniProt: A0EC05
LinkDB
Position
undetermined
AA seq 219 aa
MSRQVYVGRLSSRIRREHLQQEFEKFGKIKDIDLRNTHAFVEFENGDDAKAAISKMDNKR
LNEGSDRITVKPRDDRPQGARGPTSRDVCFNCGRKGHWANECKEGDLRDTCYRCYKKGHV
RKDCPKSRSPSEKRKYTQIQYVVVVETKTGSEGDLHLPPPSLLNPPSPEEDIDNSRNSRR
NQPGGPLPPARADPKHRCLRKAPGIQKLLVQFKQITMIQ
NT seq 660 nt   +upstreamnt  +downstreamnt
atgagtcgataagtatatgttgggcgtctgagttccaggatccgaagagagcaccttcaa
taagagtttgagaagttcggcaaaatcaaggacattgatttgcgaaacactcatgctttt
gttgagtttgaaaatggagatgatgccaaggcagccatttcaaaaatggacaacaaacga
ttgaatgaaggcagtgatcgtatcacagtcaaaccaagagatgatcgaccgtaaggtgca
agaggacccacatccagagacgtatgtttcaattgcggccgcaaaggacattgggcaaac
gaatgcaaagaaggggacttgcgagacacttgttatcgttgctataaaaagggtcatgta
cgcaaggattgtccaaaatcaaggtcgccttcagagaagagaaagtacactcaaatttaa
tatgttgtagtcgtcgagacaaagacaggaagcgaaggagatcttcatcttcctcctcca
agtcttctgaatcctccaagtccagaagaagatatcgataatagtagaaacagcagaaga
aaccaaccaggaggtccccttcctccagcgagagcagatccaaagcatcgatgtcttcgc
aaagctccaggtatttaaaaattattagtataatttaagcaaataaccatgatttaatga

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