Planktomarina temperata: RCA23_c05880
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Entry
RCA23_c05880 CDS
T03229
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCA23_c05880 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c05880 (tag)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
RCA23_c05880 (tag)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RCA23_c05880 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
AII86147
LinkDB
All DBs
Position
631516..632085
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AA seq
189 aa
AA seq
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MDRCTWVGIDKIYQDYHDTEWGVPEYDSRALWEKLILDGFQAGLSWITILKKRPAFRSAF
AGFDPHQIAGWGAAEVEVLLQNPGIVRHRGKIEATIGNAQAYLRLAEEMPFSDRMWAYVD
GRPIVAGYETLAQVPTQSPLSQKISKDLKAAGFKFCGPTIVYAWMEACGLFNNHILSCHR
HHAVTALAR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctgtacttgggttggaatagataaaatttatcaagactatcatgacacggaa
tggggcgtgccggaatatgacagccgggctctatgggaaaaactgattttagatggcttc
caagcggggttgagttggatcacgatcctaaaaaaacgcccggctttccgctcggctttt
gcgggatttgatccgcatcaaattgcgggctggggtgcagctgaggtggaggttttgctg
caaaaccctggtattgtgcgccatcgtggcaagattgaagccaccatcggcaatgcgcag
gcctatttgcgcttggccgaagagatgcccttttctgaccggatgtgggcctatgtggac
gggcgcccgattgtcgctggttatgagacattggcacaagtgcccacccaatcaccgctg
agccaaaagatttcaaaagatctcaaagcagccgggttcaagttttgtggcccgaccatc
gtttatgcttggatggaggcttgtggtctgttcaacaatcacatcttaagctgtcatcgt
caccatgcggtcacggctcttgcgcgataa
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