Planktomarina temperata: RCA23_c12160
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Entry
RCA23_c12160 CDS
T03229
Name
(GenBank) sugar ABC transporter, permease protein
KO
K10440
ribose transport system permease protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c12160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c12160
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RCA23_c12160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
GPDPase_memb
TcdA_TcdB_pore
Motif
Other DBs
NCBI-ProteinID:
AII86763
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All DBs
Position
1316418..1317386
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AA seq
322 aa
AA seq
DB search
MPNSDTTHAAGLVGAFLQNWRQNIIYIGFIAIFVVFALTLNDRGFLNPNNLLNIVRQTAM
IAVMAIAMTFVLSAGEIDLSVGAVAGLSSVTVAMVISVAGPFAGILAGLATGIAIGTFNG
WLTTKIGIPSFLTTLAMMGIAKGIAMWVSGTSAVPILSQSYAWWFGGGSIGPIPVLLFWI
LIFSAIGHVVLRRTGFGRRVLATGGGEQAAGYSGINTAKIKFRVLVISSTAAALAGMFYA
GRLQSGRFQLGEGDELSVIAAAVLGGTSLFGGKGTVIGTIVGALMIGLINNGLILMGLEF
SQQLIARGGIIILAVALSQKRA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacagtgacacaacccacgccgctggcttggtcggcgcctttctacaaaattgg
cggcaaaatatcatctatatcggttttattgcgatctttgtggtctttgcgcttacgctg
aatgacagggggtttctgaacccaaacaatctgctcaacattgtccgccagacagcgatg
atcgccgtgatggctatagcaatgactttcgtgttgtctgcaggtgaaattgatctgtct
gttggtgctgtcgcgggcctctccagtgtcactgttgccatggtgatttctgttgctggg
ccatttgcggggattcttgcaggtctggcaacaggcattgccatcggcacctttaacggc
tggctaactacaaaaattggtatcccttcgtttttaacgacactcgcaatgatgggtatt
gcaaaaggaattgcgatgtgggtttcgggcacatccgcagttccgatcttgtcacaaagc
tatgcctggtggtttggcggtggctccatcgggcccattccggtattgcttttttggatt
ttgatttttagtgcaatcggtcatgtagtcttacgccgtactggttttggtcgcagggtg
ctcgcaacaggtggtggcgagcaagccgctggctattccggcatcaacaccgccaagatc
aagtttcgggttctggtcatttcatctactgctgcggctttggctgggatgttttatgcg
ggccgactgcaatcgggccgatttcagctaggcgaaggagacgagctatcagttatcgcc
gcggctgtgctgggcggaacctcgctttttggtggtaaaggaaccgttataggcaccatc
gttggcgcgctcatgattggccttattaacaatggattaattctgatggggctggagttt
agtcaacaactgatcgcacgcggtggtatcattattcttgctgttgcgcttagccagaaa
agagcgtga
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