Planktomarina temperata: RCA23_c14610
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Entry
RCA23_c14610 CDS
T03229
Symbol
uvrA
Name
(GenBank) uvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
ptp
Planktomarina temperata
Pathway
ptp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCA23_c14610 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c14610 (uvrA)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCA23_c14610 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCA23_c14610 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_25
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_23
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AII87000
LinkDB
All DBs
Position
1570379..1573255
Genome browser
AA seq
958 aa
AA seq
DB search
MFKDLGSKMVELKNIEVRGAREHNLKNIDVDIPRDKLVVITGLSGSGKSSLAFDTIYAEG
QRRYVESLSAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMR
LLFARVGTPFSPETGLPIEAQQVQDMVDRVMAMEEGTRGYLLAPIVRDRKGEYRKEFAEL
RKQGFQRIKVDGAFYDLDEPPTLDKKFRHDIDVVVDRIVVREGVETRLADSFRTALDLAD
GITILETAPSEGDPERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPQCDGLGVELF
FDERLVVPDQTLKISDGALAPWRKGKSPYFLQTIESIAKHYAFKPSAKWKDLPEKVQQVF
LYGSGKEEILFRYDEAGRVYQVTRSFEGVIPNMERRYRETDSNWIREEFERYQNNRSCGT
CGGYRLRAEALAVKIAGLHAGQVVQMSIKEAFEWCKSVPDQLSKQKLAIAGPILKEIRER
LGFLNNVGLEYLTLARNSGTLSGGESQRIRLASQIGSGLQGVLYVLDEPSIGLHQRDNDR
LLTTLKNLRDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGQVVAKGTPEEIIANAAS
VTGDYLSGRRRIEIPTTRRVGNKKKVTVRKATGNNLQNITVDFPLGQFVCVTGVSGGGKS
TLTIETLFKTASMNLNGARQTPAPCETVKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAF
TPIRDWFAGLPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKG
ARYNRETLEVKFKGQSIADVLDMTVEVAQDFFKAVPSIREKMDALMRVGLGYIKVGQQAT
TLSGGEAQRVKLSKELSKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVDQGNSVIVI
EHNLDVVKTADHIIDIGPEGGDGGGQVVAKGTPEVVAKVPQSHTGRYLKEMLAAQKSR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaaagatctggggtccaaaatggttgagctaaaaaatattgaagtccgcggcgcg
cgtgagcataatcttaagaatatagatgttgatattccccgcgataagctggtggtgata
accgggctgtcaggttcgggaaaatcgtctttggcctttgacacgatctatgcagagggg
cagcggcgctacgttgaaagcctgtctgcctatgcgcggcagtttctggatatgatggaa
aaacctgatgttgatcacatcagcggtttgagtcctgccatctccattgagcaaaaaacc
acctctaaaaatccccgctcgacagtgggcacggtgacagaaatttatgactatatgcgg
cttttgttcgcgcgggttggcacgccattttctcctgaaacgggtctgccgattgaagcc
cagcaagtgcaagatatggtcgaccgggtcatggccatggaggagggcacgcgcggctat
ttgctggcgcccatcgtgcgcgaccgaaagggggaatatcgcaaagaattcgccgagctg
cgcaaacaaggctttcaacgtatcaaagtcgatggtgcgttttatgatttggacgagccg
cccacgctcgacaaaaaatttcgccacgacattgatgtggtcgtcgaccggattgtggtg
cgcgaaggggtcgaaacccgtttggccgatagtttccgcacggccttagatttggccgat
ggtattaccattcttgaaaccgcccccagtgaaggcgatccagagcgccataccttcagc
gaaaaattcgcctgtcccgtgtcgggttttaccatccctgaaattgagccgcgccttttt
tcctttaacgcgccctttggtgcctgtccgcaatgcgatggcctgggggttgaattgttc
tttgatgagcgtctcgtggtgcccgatcaaaccctgaaaatttccgacggtgccctggcg
ccctggcgcaaaggcaagtcgccttattttcttcaaactatagaatccatcgccaaacat
tacgcgttcaaaccctctgccaaatggaaggacctgccggaaaaagtgcaacaggttttt
ctttacggatcgggtaaggaagaaatcctgtttcgctatgacgaggccgggcgggtgtat
caggtgacgcgcagctttgaaggtgtcatccccaatatggagcgccgctaccgcgagacc
gacagcaattggatccgtgaagagttcgagcgctatcaaaacaaccgctcctgcggcact
tgcggcgggtatcgtctgcgggcagaggccctggccgtcaaaattgccgggctgcatgct
ggccaagtggtgcaaatgtccatcaaagaggcctttgaatggtgcaaatccgtgccagac
cagctgagcaaacaaaagctggccatcgccgggcccatcttaaaggaaattcgcgaaagg
cttgggttcctgaacaatgtcgggctcgaatatctcactttggcgcgcaattctggcaca
ctttcgggtggagaaagccaacggattcgccttgcaagtcagatcggttctgggctgcag
ggcgtgctctatgtgcttgatgagccaagcattggcctgcatcaacgggacaatgaccga
cttttgaccacgcttaaaaacctgcgtgatcaaggcaatacggtcattgtggttgagcat
gacgaagaggccatccgcgaggccgattatgtgttcgacattggccccggcgcaggtgtg
cacggggggcaggtggtggccaaaggcacgccggaagagatcatagccaatgcggcctct
gtcaccggggattatctctctgggcgccggcgcattgaaattccaaccacgcgccgggtg
ggcaacaaaaagaaagtcaccgtacgcaaggcgacggggaataatctacaaaatatcacg
gttgattttcccttaggccagtttgtttgtgtgacgggcgtttcgggtgggggtaagtcg
accctgaccattgagaccctgtttaaaaccgcctcaatgaacctgaatggtgcgcggcaa
acaccggcgccatgtgagacggtgaaaggtctggagcatctcgacaaggtcatcgatatt
gaccaacgccccattggtcgcacgccgcgatccaatccggccacttatacgggcgcattc
actccgatccgcgattggttcgctggcctgcccgaggccaaggcgcgcgggtataaaccg
ggacgtttttcctttaatgtcaaaggtgggcgctgcgaggcctgccagggtgatggggtg
atcaaaattgaaatgcacttcctgccggatgtctatgtcgaatgtgagacctgcaagggt
gcgcgctacaatcgtgaaaccttagaggtaaaattcaaagggcaatccattgcggatgtg
ttggatatgaccgtggaggtggcgcaagatttctttaaggcggtgccctcgatccgtgaa
aagatggatgcgcttatgcgggttgggctgggctatatcaaagtgggccagcaagcgact
acgctgtcaggcggtgaggcgcaacgggtgaaactgtcaaaagagctgtccaagcgcagc
acgggccgaaccctatatattctggatgaaccgacaacgggcctgcattttgaagatgtg
cgtaaactgctcgaagtgctgcatgagctggtggatcagggcaattctgtcatcgtgatc
gaacacaatttggatgtggtgaaaaccgcagatcacattattgacattggccccgagggc
ggcgatggcggagggcaggtggtggccaaaggcacaccggaggtggtcgcaaaagtccca
caaagccacactgggcgctatctcaaggagatgctcgcggcgcaaaaatcgcgttaa
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