Pan troglodytes (chimpanzee): 455324
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Entry
455324 CDS
T01005
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
455324 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
455324 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
455324 (THOC1)
03041 Spliceosome [BR:
ptr03041
]
455324 (THOC1)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
455324 (THOC1)
Spliceosome [BR:
ptr03041
]
Complex C
Other components
EJC/TREX
455324 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
455324 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
455324
NCBI-ProteinID:
XP_009432046
Ensembl:
ENSPTRG00000009816
VGNC:
5211
UniProt:
H2QE64
A0A6D2XTM8
LinkDB
All DBs
Position
18:14698592..14748160
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AA seq
664 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFVHHRTSDTKPTRII
RKRTAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQ
ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
PPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLE
MKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDN
ETNS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaacatcaagccattgttaagtaccttcagccaggta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtattctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattacttactacgtatgtgc
aatgatctcctaagaagattgtctaaatcccagaatacagtcttctgtggacggattcag
ctctttttggccaggcttttccctctgtctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaatacgaatgagcaggaaagcaccctgggtcag
aagcacactgaagatagagaagaaggaatggatgtagaagaaggcgaaatgggagatgag
gaagctccaacaacgtgctctattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataaattagatgatactcag
gcctcaagaaaaaagatggaagaattgaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagctgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccaatatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactttggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcgtggaaaaatgaaggttgcccaagttttgtg
aaagaaagtgtatgttttgttcaccacagaacatcagataccaaacctacgagaataatt
cggaagagaacagcacccgaggacttcctagggaaaggacccagcaaaaaaattctgatg
ggaaatgaggagttaacaaggctttggaatctttgtcctgataatatggaagcctgtaaa
tcagagacaagggaatacatgcccactttggaggaattctttgaagaagccattgaacag
gcagaccctgaaaatatggttgaaaatgaatataaggctgtgaacaattcaaattatggt
tggagagccctgagactattagcacggagaagccctcacttcttccagccaaccaaccag
cagtttaaaagtttaccagaatatcttgaaaatatggtaataaagctagccaaggaatta
ccgcctccttctgaagaaataaaaacaggtgaggatgaagatgaggaagataatgatgct
ttactgaaggaaaatgaaagtcctgatgttcggcgagacaaacctgtaacaggagaacaa
atagaggtatttgccaacaagctgggtgaacaatggaagattctggctccctacttggaa
atgaaagactcagaaattaggcagattgagtgtgacagtgaagacatgaagatgagagct
aagcagcttctggttgcctggcaagatcaagagggagttcatgcaacacctgagaatctg
attaatgcactgaataagtctggattaagtgaccttgcagaaagtctaactaatgacaat
gagacaaatagttag
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