Puccinia triticina (wheat leaf rust): PtA15_10A420
Help
Entry
PtA15_10A420 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12824
transcription elongation regulator 1
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_10A420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_10A420
Spliceosome [BR:
ptrc03041
]
Complex A
U1 snRNP components
U1 related factors
PtA15_10A420
Complex B
PtA15_10A420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
77801489
NCBI-ProteinID:
XP_053024552
LinkDB
All DBs
Position
10A:join(4426362..4426390,4426460..4426512,4426611..4427398,4427460..4427544,4427632..4427732,4427809..4428444)
Genome browser
AA seq
563 aa
AA seq
DB search
MASPAPAEVSVPIYTAAPLPPGWTEHRAPTGQFYYYHAESGESTYVRPSIPVLAPKEIDP
NVAAGGSTGSGGGQKKSSTAGNKKKEKPKTKEPIPETAWMKVTTTAGNVFYTNVENKTSS
WTVPEEIKEQLKIYEEAEARKAEETRLAELERVRLKAEEDKRIHEAEQRRMIELEVQKVR
AEVEAEAELRGLKRRNEEPPHDPASANKTRANPPGGSDTDRKTKVAKLDSAADDEDWQRQ
IAEEMAQEAAQMSPTSTIPCQPNHLPPAAIPKNPPPPAGLSLEELKATFKAMLLEKSIDP
MAPWDNELPKFVTDPRYLALPSMKERRDLFDEFCKEKIRQQRAAMAAVPKVDPPRAYRSL
LMEVVTSTRTLWEDFKSKHKKDSRFRNFGRDDREREKAFKSWLKELGEQKRQQLAKAEAD
FRGLLAEKAAPAAGAAEEEYKDFKERVKHDPRFVALASNSSKEAMWKKWVEDRSNKADEE
QRKNDGEDETKKKAEEEAPSPTKSQKGSQNGTVSEAIEDPKREKQMASLKAREEQVREMK
KKVEKDAAINRALVDKDPHGLKP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacccgcgccagctgaagtaagcgtcccgatctataccgccgccccgctaccg
ccaggttggactgagcacagagcaccaaccggacaattctactactaccatgcagagtct
ggggaatcaacatatgttcgaccatcgatcccagtcctggccccaaaggaaatagacccg
aacgtagccgccggcggatccactggatcaggaggcgggcagaagaaatcgagcacggcg
ggcaacaagaagaaggagaagccgaagaccaaggagccgatcccggaaaccgcgtggatg
aaagtgacgacgacggcggggaatgtgttctacaccaatgtggagaacaagacatctagc
tggacggtgccggaagagatcaaggagcagctcaagatctacgaagaagctgaggcccga
aaagcggaagagaccaggttggctgagctcgagcgagtccggctgaaggccgaagaagat
aagcggatccacgaggctgagcagcgacggatgatcgagctggaggtgcagaaagtgcgg
gcggaggtggaggcagaagccgagctccgaggcctcaagcgccgtaacgaagagcctcca
catgaccccgcctcggccaacaagactcgcgcgaaccctcccggtggctcggacactgat
cgcaagactaaggtcgccaagctggactcggcggccgatgatgaagactggcagcgccag
atcgccgaggaaatggcccaagaggccgcacaaatgtcccccacttctaccatcccttgt
cagcccaaccatctaccccctgctgctatccctaaaaatcctccgcctcccgctggtctc
tcattggaagaactcaaggccactttcaaagcgatgttactcgaaaaatctatcgatcct
atggccccatgggacaatgaactgcctaaatttgtaacagatccacgctatttagctctt
ccctctatgaaagaacgtcgcgacttgtttgacgagttttgtaaagagaaaattcggcaa
caaagggctgcgatggcggctgttcccaaagttgatccaccccgtgcatatagatcgttg
ttgatggaagtcgtgacatcgactaggacgttatgggaagatttcaaaagcaaacacaag
aaagattcgcggtttaggaacttcgggcgagatgatcgagagcgcgagaaggctttcaag
agttggttgaaagaattaggcgaacaaaagcgacaacaattggcaaaagccgaagcagat
ttccgagggttattggccgaaaaggctgctcctgctgctggtgcagctgaagaagagtat
aaagatttcaaagagcgagttaagcatgatccgaggttcgtagcgcttgctagtaactct
tccaaagaagcgatgtggaagaagtgggtcgaggatcgaagcaacaaggccgacgaggag
cagcggaagaacgatggagaagatgagacgaagaagaaggcggaagaagaggcaccatct
ccaaccaaatcacaaaagggctcgcaaaatgggacggtaagtgaggctatcgaggacccg
aagcgcgagaaacagatggctagcttgaaggctagagaagagcaggtgcgcgagatgaag
aaaaaggtcgagaaagacgcggcgatcaatcgtgcgttggtcgacaaagaccctcatgga
ctcaaaccctaa
DBGET
integrated database retrieval system
