Puccinia triticina (wheat leaf rust): PtA15_1A966
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Entry
PtA15_1A966 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtA15_1A966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_1A966
Enzymes [BR:
ptrc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
PtA15_1A966
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PtA15_1A966
mRNA degradation factors
5'-3' decay
Decapping complex
PtA15_1A966
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
77806943
NCBI-ProteinID:
XP_053017179
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All DBs
Position
1A:complement(join(8721956..8722652,8722733..8722893,8722961..8723432,8723514..8723887))
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AA seq
567 aa
AA seq
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MPSQPSSHNNNSRHPSDQQPRQSSSATLPATSIASSASVFSRMPLEDVLEDLASRFILNL
PIVELSQIERVCFQVEQAHWFYEDFVRPNSLLNLPSYHLKTFTGLFFEKCDFLTVDGAPL
AGWDPKTAYEKFMRYKERVPVCGAIMFNEDATQVLLVRGFKSNSSWSFPRGKINENELPK
DCAVREVLEETGFNIEPYLSLPSSWSDDSKLSAIRKTRPTNPTPNGSTNQSHKAHHQNCT
LHSEGDDHFIEITIREQRLRMYLVTGIPNDTKFATQTRQEIGRIAWFPLSDLPTFSASNS
TLGSKQLSKMINVSCPSTVESQRAHAKFYMVVPFVNDMRTWLSNNHLLTPIGQPAREHHQ
VYVQTPHLPNNQGYSANSVGHPQSHHHHHTRFENEAAAVHERVSRLQAFDFFQDEPASSA
DHLPQDNCMNSASNNTRKKNRRKQPQQASNKPTRDARHNQQQQQRLTDNLSYHSDPQTST
DDDELKVPNDTPWSDLAEGTRALQNFFFGSRNDELEGPNDPYELLANAHHPILDIHLRHD
PPSNPVPPLLTSQLHAADRCSRGIAPV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccatcccagccctcatcccacaacaacaacagccgccatccatctgaccagcagccc
agacagtcctcgtcggccaccctcccagccacatcgatcgcctcctccgcctctgtattt
agtcgaatgcccttagaagacgttcttgaagatcttgcctcccgattcatccttaaccta
cccatcgtcgaactctcccaaatcgaacgagtctgctttcaggtcgaacaggctcattgg
ttctacgaagacttcgtcagacccaacagcctgctcaacctaccctcctaccatctcaaa
accttcaccggcctcttcttcgaaaaatgcgacttcctcaccgtcgacggagcccctctg
gccggctgggatccgaagacggcttacgaaaagttcatgagatataaggaaagggtgccc
gtatgtggggcaatcatgttcaacgaagacgccacccaagtcttgcttgttcgtggattc
aaatccaactcatcctggtccttccctcgtgggaagatcaacgagaacgaactgccgaaa
gattgtgcagttcgagaagtgctagaggagaccggcttcaacatcgagccttatctctcc
ctcccctcatcctggagtgacgacagcaaactatccgctatccgcaagactcgccccacc
aatcccacgcccaacggctcaaccaatcaatcacacaaagcccaccaccagaactgcaca
cttcactcggagggtgatgatcattttatcgaaatcaccattcgtgaacagagattacgc
atgtacctagtcaccggaataccaaacgatactaaatttgctacccaaaccagacaggaa
atcggccgaatagcctggttccccctctccgacctgcctacgttcagcgcttctaacagc
acgcttggcagcaaacaactctccaagatgatcaatgtctcatgcccgagtacggttgaa
tcacagcgtgcccatgccaagttttacatggtagtgccctttgtcaatgacatgcgcaca
tggctttccaataaccatttattgacacccatcggccagcctgcgcgcgagcaccaccaa
gtctatgtccagacgcctcatctgcccaacaaccaaggctattcggctaactcagtcggt
catccacagagccaccaccaccaccacacccgattcgaaaacgaagcggcagctgtgcat
gagcgtgtcagtcgactccaggcgtttgacttcttccaggacgagcctgcgtcgtcagcc
gaccatctgccgcaagataattgcatgaactccgcatcaaacaacacccgcaaaaagaac
agacgtaaacagccgcaacaggcgtccaacaagccgacccgggacgcccgccacaatcag
cagcagcagcaacgtctaacggacaatctttcataccattcggacccccaaacgagcacc
gatgacgacgaactcaaagttcctaatgataccccttggagcgacctggccgaggggacc
cgggccctccagaacttcttcttcggctcccgcaacgacgagctcgagggcccaaacgac
ccctacgaactcctcgctaacgctcatcatccgatcttggacatccatctccgccacgac
ccgcccagcaatcccgtgccgcctcttcttacctctcagctccatgctgctgatcgttgc
agccgaggcatagctcctgtatag
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