Puccinia triticina (wheat leaf rust): PtA15_3A697
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Entry
PtA15_3A697 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_3A697
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_3A697
Enzymes [BR:
ptrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PtA15_3A697
Spliceosome [BR:
ptrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PtA15_3A697
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
PtA15_3A697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
DUF5792
Cas6_N
Motif
Other DBs
NCBI-GeneID:
77808585
NCBI-ProteinID:
XP_053018883
LinkDB
All DBs
Position
3A:complement(join(6504617..6505041,6505113..6506507,6506578..6507079,6507161..6507376))
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AA seq
845 aa
AA seq
DB search
MSDFIFTIDSEDEGNGQTAASNKSKSTSTKHAKKRANDVEPTLELNPTFFLDGLGLDPDL
NSEPKSNRSRLLNEFEDPLERFKKKNALPRVSIDEIVARHKKSGDHQDALVDELEDWKDE
DSAEEEEAGTDGASEEGSSVESEDLDLEGESGNEEEGGCSNEDDDADYSKEDGDETAEDD
FDSDAGASDLAEDGPEDEKTDKAGETDGKSQDVSLNAYFDQSVVPFGPATKEELVKDSHD
QPFSSLPGAASLSRPVLMGLSSMSITSPTPIQRQAIPLGLLGKDLVCSSVTGSGKTLGYM
VPIVERLIWRDKKGGGRTRVMILTPTRELAVQVFQVGKLLARFTDLTFSLCVGGMDLRTQ
EAELRERPEIVIGTPGRVIDHIRNTRGFSLETLEILVIDEADRILEEGFQDELEEIIRNC
PRSRQTMLFSATVNESVADLAKLSLDKPIRIKIDPPKSTAAGLTQEFLKVKDSSSNKKAA
SLTDYTRQAILVTLCKASAFSKGRTIIFFRSKVGAHRMKIIFSLFSLKAEELHGNLTQQQ
RLAALQKFKDGETSFLLATDLASRGLDIKGVERVINYEPPTQYDVYLHRIGRTARAGAKG
SALTLVGESDRKLIKEARKNCLATQGAIKNRRLDPNLVKDVKEELEKLSSTISEIIEEEK
EEKELRNSEMQLKKGQNLMEHEEEIKSRPARTWFQSELDKKKSKKIGTSAHTANFAKTES
SVLPKKTAIKRDRFDGLSRKQKRRKMGQEEDAKERVLPAINSSIRAAKKSQRPIKITASQ
SEQDSHLLKNQKQKRKKSKENKSKKPRSTFSVDLKTPKSSSKPVSKALKKADTLKSKSGG
KRKSK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttcatcttcaccatagacagcgaagacgagggtaacggacagacagccgca
tcaaacaaatcgaaaagtacatccacgaagcacgcaaagaagcgcgcaaatgatgtcgaa
cccactctagaactgaatccaaccttcttcctcgacggactgggacttgatccagatttg
aattctgagccaaaaagtaacagatccagactgctgaatgaatttgaagatcccttggaa
agattcaagaagaaaaacgccttgccaagggtatcgattgacgaaattgtggcacgacat
aaaaagtcgggtgatcatcaggatgcactcgtcgatgaactggaagattggaaggacgaa
gatagtgcggaggaggaggaagctgggacagatggtgcttccgaagaaggctcatcagtt
gaaagcgaagatcttgatctagaaggtgaatccggaaatgaagaagaaggaggctgcagc
aatgaagatgacgatgcagactacagcaaagaagatggcgacgagactgctgaagatgat
ttcgacagtgacgccggggcctcagacttggctgaggacggcccagaggatgaaaaaacg
gacaaagctggagagactgacggtaaaagtcaagatgtttctcttaatgcctacttcgat
caatcagtggttccttttggcccggctacaaaggaagagctcgtcaaagacagtcatgat
cagccattctcctctttaccgggcgctgccagtctcagtcggcctgttctcatgggactt
tcttcgatgtctatcactagtccgacaccgatacagcgacaagcaataccactaggattg
ctgggcaaggatttggtttgctcgtctgtgaccggatctgggaaaacactcggctacatg
gtccctattgtagaacgattgatttggcgagataagaaaggtggtggacgaacacgagtc
atgatattaactcccactcgtgaattggccgtccaagtgtttcaagtgggtaaactgcta
gctcgatttacagaccttacattctccctgtgcgtcggagggatggacctgaggactcaa
gaagccgagttgagagaaagaccagaaatcgtcatcggcactcctggacgtgtcatcgat
cacattagaaacacaaggggcttctcacttgaaacgctggaaatcttggttattgatgag
gccgatcgaatcttggaggaaggtttccaagacgaattagaggaaatcatcagaaactgt
ccccgctcgaggcaaacgatgcttttctcagctacggtaaatgagtcagtggccgatcta
gctaagctttctttagacaagccgattcgaatcaagatcgaccctccaaaatctacagcg
gctggactgacgcaggagtttctgaaagtcaaagacagttcaagcaacaagaaagctgca
tctttaacggattacactagacaagccatcctagtcactctctgtaaagcatcagctttt
agcaaagggcgtacaatcatcttttttcggagtaaagtaggggcccatcgaatgaaaatt
atcttttcattattctctctgaaagccgaggaacttcacggaaatttaactcaacagcaa
cgactcgctgctttgcaaaaattcaaagacggtgaaacttcttttctcttagcgaccgat
ctcgccagtcgtggtttagatatcaaaggagtcgaaagagtgattaattatgaacccccg
acccagtatgacgtctatctacaccgcatcggtcgaactgcccgagctggagcaaaaggc
agcgccctgacgttggttggggaatctgatcgcaaattgatcaaagaggctcgaaagaat
tgtctggctactcaaggtgcgataaaaaaccgccgacttgatcctaatctggtcaaagac
gtcaaagaagaactggaaaagctctcttccactatctccgagatcattgaagaagaaaag
gaagaaaaagagttgaggaattcggagatgcagctgaaaaagggtcagaatctaatggaa
catgaagaggaaattaaaagtcgaccggctagaacttggtttcaatcggaattagataag
aaaaaatctaagaaaattggaacatctgctcataccgctaacttcgcgaagaccgagagt
tcggttttgcctaagaagactgcaatcaaaagggatcgattcgatggattatcacgtaaa
cagaaacgacgaaagatgggccaggaagaggatgcaaaagaacgcgtgttaccagctatc
aattcctcaatcagagcggcaaagaaatcgcaacgaccgatcaaaatcaccgcctctcaa
tctgagcaagattctcatctactcaagaatcaaaaacagaagcggaagaaaagcaaagaa
aacaagagcaaaaagccgagaagtactttcagcgtcgatctgaagaccccgaaatcttcc
tccaaacctgtctcgaaagcgcttaaaaaagctgatactctcaaatctaagagtggaggc
aagcgcaaatctaagtaa
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