Puccinia triticina (wheat leaf rust): PtA15_9A605
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Entry
PtA15_9A605 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PtA15_9A605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_9A605
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PtA15_9A605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Motif
Other DBs
NCBI-GeneID:
77813727
NCBI-ProteinID:
XP_053024033
LinkDB
All DBs
Position
9A:join(6148839..6148850,6148948..6149091,6149181..6149235,6149307..6149336,6149396..6149509,6149646..6149814,6149927..6149987,6150072..6150749,6150822..6151040,6151114..6151292,6151369..6151586,6151661..6151761)
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AA seq
659 aa
AA seq
DB search
MVGGRELTIYAIDVSPSMSTKRSVVDPTTGETTSVTNLEHGLEVVKHQVANMLLAGLKTV
HCGIVLFGTDHTDNSLSDSGYEYIWEYVAPTQPHALTLSRITTIRDHLTTSEKPFKGDLL
SAIILCNHLMGATLGAKKWTRKLVLVTDAQTETDWNGWKEQRDQMKLDDVRLNVIGVDFD
DPEYGYIQPNKPETKGINEKILYKLCRGLANTSSCSTAEAAVLSAQSPQPRVSSSVPAPV
LLSLGYPDQETSETEGYDPQETLFMRCELRKCTTIVRPMSAKKMSKFGVPSEIERRRKDL
ESMNARSQPGHQLPADDDEDDEDGLLGLLQVNRKHVYVGKKAQDGPSKGAGPGDDSDDLD
MQDSSDEEPAPTAGREADRENLAKAYKYGASLVIVDQEDEAAIRQSFTESLEITGFVKLS
NVPRDHLLNNVYYLYTIRTDYGSQITFSAIVRAMHTAKRAAIARYVSRSKTAEPKMVLLI
PVVEETIRYFLFIQVPFAEDLREYDFPALASVTIPPGRKIPSQYVPTAEMQEAMDDLVDK
MDLSVEDVPSTSEDDRTRPWLRLEETCNPAIHHVKNCVLYRLSHPTCVDLAPVHPELAKC
MAPPPHVAQRAASSLERVKQLMETKTVPALPKSQRRKVTRQTVADGDDEIDLDDILGDA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggcagagaactgacgatatatgcgattgatgtctccccgtcgatgtccacg
aagaggagtgtcgtggatccaaccactggcgaaaccacatcggtgactaacttggagcat
gggttggaagtggtcaagcatcaagtcgcaaacatgcttctcgctggcttgaaaaccgtt
cactgtggaatcgtccttttcggaacagaccataccgacaattcgttgtcggatagtgga
tatgaatacatttgggagtatgtcgccccaacacaaccccacgccctcaccctttcacgt
attactactatccgggatcatttgaccacatctgagaaacctttcaaaggagatttatta
tcggccatcattttatgcaaccatctcatgggcgcaactttaggagccaaaaagtggact
cggaagcttgtcttagtcacagatgctcaaaccgagactgattggaacgggtggaaagaa
caaagggaccaaatgaagttggatgatgtcagattgaacgtgatcggcgttgactttgac
gacccggaatacggttatatccagcctaacaagccggaaaccaagggtatcaatgaaaaa
atactttataaactatgtagaggtcttgccaatacttctagctgttcgacagccgaggca
gccgtcctgagcgctcaatctccccagccgcgtgtctcgagcagtgtcccggctccagtg
ctgctttctctgggctatcctgaccaggagacttcagaaaccgaaggctatgatccgcaa
gagactctttttatgaggtgcgagttgcggaaatgtactaccatcgtaagaccgatgtct
gccaagaaaatgagcaagtttggcgttccgagcgagattgaacggaggcgcaaggacttg
gaatcgatgaatgcaaggagccaaccgggacaccagcttccggcggacgatgatgaggac
gatgaagatggtctcctgggtctcttacaggtcaatcggaaacatgtctacgtcggcaag
aaagcccaagatggcccgtccaaaggcgccggcccgggcgacgacagcgatgaccttgac
atgcaagactcgagtgacgaggagccggcgccgaccgcaggccgagaggccgatcgagaa
aacttagccaaggcttataaatatggagcaagtctggtgatcgtcgatcaagaagacgag
gcagcgattcgccaatctttcacggaatctctggaaattacaggattcgtaaaactttca
aacgtccctcgggatcacctcctgaacaatgtttattacctatataccatacgaacggac
tatggcagccagatcaccttttctgcgattgtccgggccatgcacaccgcgaagcgagcg
gctattgctcgatatgttagtcggtcaaagacggccgaacctaagatggtgctcctcatt
ccggttgtcgaagagacgattcgatattttctattcatccaggtccccttcgcagaggat
ctgagagaatacgactttcctgcgcttgcatcagtcacgattccgccgggcagaaaaatt
ccaagccaatacgtaccgacggcggagatgcaagaagccatggatgatctggtggacaag
atggacctatcggtggaggatgtgccgagcacatcggaggacgacaggactcgaccatgg
ctgaggctcgaagagacctgcaatccagccatccaccatgtcaagaactgtgtcctctac
cgactcagccatcccacatgcgtagacttggctcccgtgcatccggaattggccaagtgc
atggctccacctccgcacgttgcccaacgggcagcctcgagtctggaacgcgtcaaacag
ctgatggagaccaagactgtgcccgctctacctaaatcgcagcggaggaaggtcactcga
cagactgttgcagacggcgatgatgagattgatctggatgacatcctgggagatgcttga
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