Paenibacillus tritici: KDC22_21220
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Entry
KDC22_21220 CDS
T07560
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri00300
Lysine biosynthesis
ptri00470
D-Amino acid metabolism
ptri01100
Metabolic pathways
ptri01110
Biosynthesis of secondary metabolites
ptri01120
Microbial metabolism in diverse environments
ptri01230
Biosynthesis of amino acids
Module
ptri_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
ptri_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDC22_21220 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDC22_21220 (lysA)
Enzymes [BR:
ptri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KDC22_21220 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QUL52938
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Position
complement(4883142..4884476)
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AA seq
444 aa
AA seq
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MFLHGTSRINDAGHLEIGGCDVTELKAEYGTPLYIVDEQLVRRRCREYMEAFTASGLGFQ
VAYASKAFSTMAMCRLADEEGLSLDVVSDGELYTALQAGFPAERIHFHGNNKTPDEIEMA
IDAGIGCFVVDNLVELRLLQAIAARKEVTVDILLRVTPGVEAHAHHAYASTGQTDSKFGF
DIGNGSASEAVRQADSQANLNLLGVHSHIGSQIFETEGFQLAIERIAEFTRKVKEELGIS
FPVVNLGGGFGIRYVDGDTPLEVSEYVAAITEAVKTYFTGIGDALPQIWVEPGRSIVGDA
GTTLYTVGTSKEIPGVRKYVAVDGGMTDNPRPALYESKYEALLASRATEPNEETVSIAGK
CCESGDMLIWDVELPKVESGDLLAVACTGAYNYSMASNYNRIRRPAVVFVQNGQSDLVVR
RETHQDIVANDLVPARIAKQAVAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacacgggacgagccgaattaacgatgcaggacatttggagatcggcggatgt
gatgtaacagaattgaaagcggagtacggtacaccgctatatatagtggacgagcaatta
gtccgtcgccgttgccgtgaatacatggaggcatttaccgcgtcgggtcttggcttccag
gtggcatacgccagcaaagctttttcaacgatggctatgtgccgtctggccgatgaggaa
gggctgtcgctggacgtcgtttccgatggagagctgtacaccgcactgcaagccggattc
ccggcagaacgcattcacttccacggcaacaacaagacaccggatgagattgaaatggcc
attgatgcggggatcggctgctttgtcgtcgataatctggtagaactccgtctgctgcag
gccattgctgcccgcaaggaagtgaccgtcgacattctgctgcgcgtcacacctggggtg
gaagcccatgcccatcatgcgtatgcttctacgggacagaccgattccaaattcggcttc
gatatcggcaacggttcggcgagtgaagcggtcagacaggcagacagccaggccaatctg
aacctgctgggggttcactcccatatcggttcgcagatttttgagactgagggcttccag
cttgccattgaacggatcgctgaattcacgcgtaaagtcaaggaagagctggggatcagc
ttccctgtagtcaacctgggcggcggcttcggaatccgttatgtggatggcgatacaccg
ctggaagtgtcggaatatgtcgcagcgattacagaggcagtgaagacgtacttcaccggc
attggcgatgcgctgccgcagatctgggtggagccgggccggagcatcgtaggcgatgcc
ggaacgaccctgtatacggtggggaccagcaaggagatcccgggtgtacgcaaatatgta
gccgtcgatggcggcatgacggataatccgcgtccggccttgtatgaatccaagtacgaa
gcgctgctggcgagccgtgcgacggagccgaacgaggagactgtatccattgccggcaag
tgctgcgagagcggagatatgcttatctgggatgtagagctgcccaaggtggagagcggc
gatttgctggctgttgcctgcacaggcgcctacaattactccatggccagcaactataac
cgcatccgccgtccggcggtagtgttcgtacagaacgggcagagtgatctggttgtgcgc
cgcgagacccatcaggatatcgtggccaatgaccttgtacctgcacgtattgccaaacag
gccgttgccaaataa
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