Paenibacillus tritici: KDC22_30040
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Entry
KDC22_30040 CDS
T07560
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri00521
Streptomycin biosynthesis
ptri00523
Polyketide sugar unit biosynthesis
ptri00541
O-Antigen nucleotide sugar biosynthesis
ptri01100
Metabolic pathways
ptri01110
Biosynthesis of secondary metabolites
ptri01250
Biosynthesis of nucleotide sugars
Module
ptri_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KDC22_30040 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KDC22_30040 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KDC22_30040 (rfbD)
Enzymes [BR:
ptri01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
KDC22_30040 (rfbD)
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GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
NAD_binding_10
adh_short
DapB_N
CBM58
Motif
Other DBs
NCBI-ProteinID:
QUL54472
LinkDB
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Position
complement(6967698..6968567)
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AA seq
289 aa
AA seq
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MVKTKVLVTGAAGQLGQDLMLLLQGQDYDVLGCDRQEMDITNLDQCQEIIGAFKPDAVIH
CAAHTAVDAAESDVDAAYLINATGSRNVALAAEKAGAKLVYISTDYVFDGMGEQPYHEYD
NTDPKSIYGKSKRAGEILVQSLSSKFFIVRTSWVYGKYGNNFVKTMLKLGQEKPLLQVVD
DQKGSPTYTVDLAKFLLELIQTEKYGVYHASNTESCTWYEFTQAIFAEAEELLGLKFTAK
LEPCATEQFPRPAPRPRNSVMEHLSIRTNGFKDIRPWREGLRDFLLELK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagacgaaggtactggttacaggggcagccggacaattaggccaggatcttatg
cttttgcttcagggtcaggattatgatgtgctcggctgtgaccgtcaggagatggatatt
actaatctagatcagtgccaggagatcatcggggcttttaagcctgatgctgtcattcat
tgtgcggctcatactgcggttgatgcagccgagtctgatgtagatgcagcttacctgatt
aatgctactggaagccggaacgtggccctggcagccgagaaggcgggagctaagctggtc
tatatcagtacggactatgtgttcgatggcatgggggaacagccttaccatgaatatgat
aacactgatcctaagagcatctatggtaaatccaaacgggcaggagagatactggttcag
tccttatcttctaaattctttatcgtgcgcacctcttgggtctatggcaaatacggcaat
aactttgtcaaaaccatgctgaagctggggcaggaaaagccgttgctgcaggttgtcgat
gaccagaaaggctcgcctacctataccgtggacttggcaaaattcttgcttgagcttatc
cagactgaaaagtatggggtataccacgcctcgaacacagagtcctgcacctggtatgag
ttcacacaggcgatttttgcggaggcggaggaacttctggggctaaagttcacagcgaag
ctggagccttgtgctaccgagcagtttcctcgtccagctccacgcccgcgtaattcggtg
atggagcatctgtccatccgtacgaacgggttcaaggatatccgtccatggcgggaaggg
ctgagagactttttgctggagctgaaatag
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