Pseudomonas tritici: HU722_0001690
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Entry
HU722_0001690 CDS
T07594
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU722_0001690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrt03021
]
HU722_0001690
Transcription machinery [BR:
ptrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU722_0001690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_31
Sigma70_ECF
HTH_24
HTH_3
HTH_11
HTH_Tnp_4
HTH_40
HTH_7
HTH_38
Rv2175c_wHTH
GerE
HTH_28
HTH_IclR
HTH_36
MarR_2
Fe_dep_repress
PCI
TnsD
Motif
Other DBs
NCBI-ProteinID:
QXH84222
UniProt:
A0A8I0D2B8
LinkDB
All DBs
Position
392261..392770
Genome browser
AA seq
169 aa
AA seq
DB search
MDTATDGQQQLHLLYRDHHGWLQGWLRKRLGDREHAADIAQDTFLRLLVSGRFPGDKESR
SYLAQIARNLVIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMRIDAMLDRMP
DNVRRAFLLSQFEGLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgactgacggccagcaacagcttcatcttttgtaccgcgatcatcacggc
tggctccaaggctggctgcgcaagcgcctgggcgatcgcgaacacgccgccgatatcgcg
caagacaccttcctgcgcctgctggtgtcgggacgcttccccggcgataaggaaagccgc
agctacctggcgcagatcgcacgcaacctggtgatcgaccaatggcggcgcctgcgcatt
gagcgcgcctatttggaaagcatcgcgcacttgcccgagccggagtcgccgtccctggaa
acccgcgcgctgatcctcgaaaccctgatgcggatcgacgccatgctcgaccgcatgcct
gacaacgtgcgccgcgcattcctgctgtcgcagttcgaaggtctgagctatgcacagatc
gccgagcgtttgggcgtcaccgtcagctcggtgcagaaatacatgacccgtgcgattgtg
gcttgctaccaagtagcttacgaagaatga
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