Pseudomonas tritici: HU722_0024295
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Entry
HU722_0024295 CDS
T07594
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU722_0024295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrt03021
]
HU722_0024295
Transcription machinery [BR:
ptrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU722_0024295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
GerE
HTH_24
HTH_38
HTH_28
HTH_3
HTH_11
HTH_29
HTH_AsnC-type
HTH_31
HTH_36
TetR_N
OrgA_MxiK
HTH_Tnp_ISL3
TnsD
Xre-like-HTH
MarR
HTH_Tnp_4
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QXH83066
UniProt:
A0A8I0D1Z0
LinkDB
All DBs
Position
complement(5328876..5329412)
Genome browser
AA seq
178 aa
AA seq
DB search
MPPLPESVAAPFSVGSLYSAHHGWIQRWLARKLGNVSDAAELAHDVFVRLLSHPREFGSE
GHARAYLSTLSRNVCVDFFRRKQVEQAWLEVLASRPEECAPSEEHRALVLEALVHLQAML
DRLPAKVSEAFCLAQIEGLSYREIAARIGVSERTVTKYIGQAMFQCMVLEAELDGALS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcttcccgagtccgtcgccgcacctttcagcgttggcagcctgtattcggcc
catcacggctggattcaacgctggctggccagaaaactcggcaatgtcagtgatgccgcc
gagctggctcacgatgtctttgtcaggctgttgagccatccgcgcgaatttggcagcgag
gggcacgcgcgtgcgtacctcagcaccttgtcacgcaatgtgtgcgtggattttttccga
cgcaagcaggtggagcaagcctggcttgaggtgttggcgagccgacctgaggaatgcgcg
ccgtcggaagaacaccgcgcgttggtgttggaggctctggtgcatttgcaggcgatgctc
gatcgcttgccggccaaggtgtccgaggcgttctgcctggcccagatcgagggcttgagc
tatcgcgaaatcgcggcgcgcattggcgtgagtgagcgcaccgtcaccaaatacatcggc
caggccatgttccagtgcatggtgctggaggccgagttggacggtgccttgtcatga
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