Portunus trituberculatus (swimming crab): 123499700
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Entry
123499700 CDS
T07853
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03022
Basal transcription factors
ptru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123499700
09124 Replication and repair
03420 Nucleotide excision repair
123499700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123499700
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123499700
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123499700
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123499700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Pus10_C
Motif
Other DBs
NCBI-GeneID:
123499700
NCBI-ProteinID:
XP_045104033
LinkDB
All DBs
Position
50:complement(15927429..15953537)
Genome browser
AA seq
505 aa
AA seq
DB search
MTAPDATSRQHFLSGQTGARDSSISFCTVTPLTCPLTSAKASVHLDTPPSNTLAPHSPLH
FRYTERQLLLLPYPVWTPWLTELPALSRQFILRLLFVNKPVGQVLLASWIPQHDPGRDVG
DIAAEHRQGTQVLLDMCIWQEVKDQQGNMAIRLSSTFRENLKVAMLGGGTPWTMSATLDS
DPHQRNVEFLDKYAMDRWESVLQFLVQPGRGQKAISRDAMRTLLHAGLIESSGESDNMQI
TSAGFQFLLLDTASQVWFFILKYLETVTERGMSLVACLTFLFKLSFSTLGKDYSMEGMDN
ELLTFLQHLREFGLVYLRKRSSGRFYPTRLALNITAGQNKGIIDVPKQGNLVIETNYRVY
AYTTSELQISLLAIFCDIEGRFPNMVVASISRSSVRRALLKGIGAEQIISFLKQHCHPQM
YKLSSVVPRTVADQIKLWEMERERLEFTEGVLYKDFMSLHDFNLLSNYASSNGVLIYSDE
RQRTMVVTKKGHPSIKTFWKEEQAK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcctgacgcaacgtcccgccaacatttcttatctggtcagacgggtgcaagg
gattcgagcatatcattctgtacagtcactcctctcacctgcccgctcacctctgccaaa
gcttcggtacacctcgacacgccaccttccaacacccttgcccctcactcgccccttcac
tttcgttacactgagaggcagctcctgcttctaccctatccagtttggactccgtggctc
acggagcttccagcgctgagtcgacagttcatcttgcggctactgtttgtcaacaagcca
gttggtcaggtcttgctggcatcgtggatccctcagcatgaccctggcagggatgtggga
gacattgcagccgagcaccgacagggaacacaagtcctgttggacatgtgtatctggcag
gaggtaaaggaccaacaaggcaacatggccatcagactgagctctactttccgagagaac
ctcaaggtggccatgttaggaggagggacgccatggaccatgtcagccacacttgattca
gatccccaccaaaggaatgtggagtttctggacaagtatgccatggatcgctgggagagt
gtgttacagtttttggtccagccaggacggggacaaaaggcaatctcacgtgatgctatg
aggacactgcttcatgctgggcttatagaaagcagtggagagtcagacaacatgcagatt
acaagtgcaggcttccagttcctgctgttggacactgcatcacaagtgtggtttttcatc
ctcaaatacctggaaactgtgactgaacgaggcatgagtttagttgcctgcctcaccttt
ctgttcaagctctccttttcaacccttggcaaggattacagcatggaaggaatggacaat
gagctcctcacctttctgcaacacctccgggagtttggtctggtgtacctgcgaaaaaga
agctctggaaggttttatccaacaagacttgcccttaatatcactgctggccagaacaag
ggtatcatagatgttccaaagcaaggcaatcttgtaattgagaccaactaccgtgtctat
gcatataccacatcagagttgcagatttctcttcttgccatcttctgtgacatcgaggga
aggtttccaaacatggtggtggcaagtatctcgcgcagcagtgtacggagagccctctta
aaaggcataggggctgaacagatcatcagtttcttgaagcaacattgtcatcctcagatg
tataagttaagcagtgttgttcctcgcaccgtagcagaccagatcaagttgtgggagatg
gagagagagcgcttggagttcactgaaggagttctttacaaagacttcatgtcactacat
gactttaatttgttatcaaattatgcttcaagcaatggcgttcttatttattctgatgaa
agacagagaacaatggttgtgacgaagaagggacatccaagcatcaagacattttggaaa
gaagagcaagctaaataa
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