Portunus trituberculatus (swimming crab): 123505332
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Entry
123505332 CDS
T07853
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptru03009
]
123505332
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123505332
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
Pre-60S particles
Helicases
123505332
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
123505332
NCBI-ProteinID:
XP_045112457
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All DBs
Position
18:complement(10879964..10889082)
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AA seq
583 aa
AA seq
DB search
MDTLWDSLPLTLVEPVKRTIQDLDFKKMTPVQAACIPLLLTHKDVAAEAVTGSGKTLAFM
IPIIQILVQREEPLKKHDVGALIISPTRELATQIYEVLQSFLAHLPQFSSLLTVGGSQVG
DDLQNFKTRGSHILVATPGRLQDLLARNSASGPSLAGGVKALEVLILDEADRLLDLGFFN
TLNTIFAYLPKQRRTGLFSATQTSDVISLIRAGLRNPVKVKVKEKEATGDERTPVSLLNY
YMVCEEDKKFSTLVTLLKEREKEKTMVFFATCACVEYFTVILRDLFKKSQVLSIHGKMKD
KRFKIFDRFRSLNSGILLCTDVMCRGVDIPSVDWVIQFDPPSTASSFVHRCGRTARIGNE
GSALVMLLPCETDYVNFIKINQKVSLSPMECPVSIPGLQQKIRKLQLQDRLVMDKANRAF
VSFVQSYAKHECSVILSLKNLNFGKMATSFGLLKMPRMPELKGINISDFVPVKMDYNTIA
YQDKQKEKSRQQKLSTYKETGSWPGMKLHKPKQESWSQTKEKKAKKKKKNEKKRKGHQFT
QEDLDDLEEDFRMIKKLKKGKVKNKDFDKHFGCELDEVENQET
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggacaccttgtgggacagccttccactgacacttgtggagccggtgaagcgtactatc
caagatctggatttcaaaaaaatgacaccagttcaagctgcatgcatccctttgcttctc
actcacaaggatgtggcagctgaggctgtgacaggaagtgggaagactttagcttttatg
attcccatcattcaaattttagttcagagagaagaacccttgaaaaagcatgatgttggt
gctctcattatttctccgacacgtgaattagcaacacaaatttatgaagtattgcagagc
tttctggcacatttgccacagtttagttctttgctaactgttggaggatctcaggttggg
gatgaccttcaaaatttcaagaccagaggtagccacatacttgtagcaaccccaggccgc
ctacaggatctcttggcacgtaattcagcaagtggccccagtctggctggtggggtgaaa
gcacttgaggttctcatccttgatgaagctgatagacttcttgaccttggcttcttcaac
acacttaatactatttttgcttatcttcctaagcagaggagaactggacttttttctgcc
acccagacctcagatgtgataagcctgattcgtgctggtctcaggaatcctgtcaaggtc
aaagtgaaggagaaggaggctacaggtgatgagaggactcctgtgtcattgctgaactac
tatatggtgtgtgaagaggacaagaaattcagtacactggtaactcttcttaaagaaaga
gaaaaggagaaaaccatggtcttttttgctacttgtgcatgtgttgaatacttcacagtc
attctgagagacctttttaagaagtcacaggtactgagtatacatgggaaaatgaaagac
aagagattcaagatatttgataggtttagatcactaaattctgggattttgttatgcact
gatgtcatgtgtcgaggagtagacattccaagtgttgattgggtgatacagtttgatcct
ccatccacggcctcatcttttgttcaccgatgtggccggacagcaaggataggaaatgaa
ggctcagctttagtgatgctgctgccgtgtgagactgattatgtaaactttataaagata
aatcagaaggtgagcttgagtcccatggaatgtccagtttccatacctggcctacagcag
aaaataagaaaattgcagctgcaggaccgacttgtaatggacaaagctaacagagcattt
gtgtcatttgttcaatcctacgcaaagcatgagtgtagcgttatccttagccttaagaat
ttaaactttggtaagatggcaactagttttggactgctgaaaatgcctagaatgccagaa
ttgaaaggtatcaatattagtgattttgttccagtcaagatggattataataccattgct
taccaagataaacaaaaagagaaaagtagacagcaaaagctaagtacatacaaggaaact
gggtcatggccagggatgaagcttcataaacccaagcaagagtcctggtctcaaactaaa
gagaagaaagcaaagaagaagaaaaagaatgagaaaaagagaaaaggacatcagtttaca
caggaagatctggatgatttggaggaggatttcagaatgattaaaaagttaaagaaaggc
aaagtaaagaacaaagattttgacaaacactttggctgtgaacttgatgaggtagaaaat
caggaaacataa
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