Portunus trituberculatus (swimming crab): 123518815
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Entry
123518815 CDS
T07853
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123518815
03015 mRNA surveillance pathway
123518815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123518815
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123518815
mRNA cycle factors
P-body specific factors
123518815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
123518815
NCBI-ProteinID:
XP_045135771
LinkDB
All DBs
Position
44:19125344..19154715
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AA seq
651 aa
AA seq
DB search
MTVKTVDVGKRDSTKSYSENTSKKLSEVKHNIKAKKERSNGPPTKVVMRRLPPTMTEEEF
MEAINPVPEYDYFTFCPADNSLGPNAFTRAYINFKNSSEIFNFRDKFDGYVFVDQKGNEF
PAMVEFAPFQKVPKRIGSKKKDARCGTIDQDPDYLEFLETIANPETVTLQPLEAVLEEIQ
AHDRELKANNGYLKVKTPLLEYIEQRKAEKLRSKEEKREERRRKEFERKKAKEDEKRKKK
EVKEQKEMKKKDEQKEDASGVKLQVLQPERGKDDSQGDVRPTRKERDRERYERERQRRME
EDQQRREREKEKVKFNRRDKEKEREERIRRQEEKFRLRDEERLRQKEEGKEDRNRHKDEG
RDDRLRHRDEGREDRVRYRDEGRDDRIRHRDDGRDDRTRHREEGREDRTRHRDEGRHREV
REDRTRHREEDWEEQSKYKEEGREENVRHRDEMREEGGQEGHRVHKPEGVKSKRYSEGRK
KEEKDRRIKEDRGKRYEDGHKIKSTDDNGTSVEADDQQRGESNSKDGDAGVGISAEKTVT
QKKREKDPRVERRIRNKDRPAMALYRPGQSRLSSRMRNEREEGVDTSSSSPSPVMLDTKK
PAPPKKKGASTQKNETGGDHCSDSLSTADNQKDDNSVAQRDSGGEDNNKDE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgaagacggttgatgttggtaagcgagacagcacaaaatcatacagtgaaaat
acaagcaaaaagttgtcagaggtcaagcacaatatcaaagctaagaaggaacgaagtaat
ggtccgccaacgaaggtagtaatgcggcgactgcctccaaccatgaccgaggaagagttt
atggaggccatcaatccagtgcctgagtatgactacttcactttctgccctgctgacaac
agcctgggtcccaatgcctttactcgggcttatatcaactttaagaattcttcagagatc
ttcaatttcagagacaagtttgatggatatgtgtttgtggatcagaaaggcaacgagttc
ccagccatggtagagtttgccccattccaaaaggtacctaagaggatcggcagtaagaag
aaggatgctcgctgtggcactattgaccaggacccagactacttggaattcctggagact
attgccaacccagagacagtcactctgcagcccttggaagctgtattagaagaaatacag
gcacatgatagagaactgaaggccaacaatggatatttgaaagtgaagacacccttactg
gaatacattgagcagaggaaagcagaaaaactgagaagtaaagaggaaaagagggaagag
agaaggaggaaagaatttgagagaaaaaaagcaaaagaagatgagaagaggaagaaaaag
gaagtgaaggaacagaaggagatgaagaaaaaagatgagcaaaaagaagatgcctctggg
gtcaagctacaagtactgcagccagaacgtggcaaggatgacagccagggggatgtccga
ccaaccaggaaggagagagacagggagcgatatgagagagagaggcagcggagaatggaa
gaagaccagcagagaagagagagggaaaaggaaaaagtgaagtttaaccgcagagataag
gaaaaggaacgagaagagagaatcaggcggcaggaggaaaagttccgattaagggatgaa
gagaggctgaggcagaaggaggaaggaaaggaagaccgaaatagacacaaggatgaaggg
cgagatgatagactgaggcacagagatgaagggagggaggatagagtcagatacagagat
gaaggaagagatgatagaatacgtcatagagatgatggaagagatgataggacacgacac
agagaggaaggaagagaagatcgaacaagacacagagatgaaggcaggcatagagaagtg
agagaggatcgaacaagacacagggaggaagactgggaggagcagagtaaatataaggaa
gagggaagagaggaaaatgtgagacatagagatgaaatgagggaggaaggaggtcaagag
ggtcatcgtgtacataaacctgaaggagtcaagtctaagcggtacagtgaaggaaggaag
aaagaagagaaggacagaaggatcaaggaagacagaggcaagagatatgaggatgggcat
aaaataaaaagtacagatgataatggaacatcagtagaggcagatgatcagcaaagaggc
gagtcaaacagcaaggatggagatgcaggggtagggatatctgcagaaaaaacagtcaca
cagaagaagagagagaaagacccaagagttgagaggagaatcaggaacaaggaccgacca
gccatggctctctaccggccagggcagtctcgcctcagtagccgaatgaggaatgaacga
gaagagggggtggatacctcctcatctagccccagccctgtcatgctggatacaaagaag
ccagcaccacccaagaaaaagggagcatccacccagaagaatgaaactggaggtgaccac
tgcagtgacagtctgtctactgctgacaatcagaaagatgacaatagtgttgctcagagg
gacagtggtggggaggataacaacaaggatgaatga
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