Portunus trituberculatus (swimming crab): 123520262
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Entry
123520262 CDS
T07853
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123520262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123520262
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123520262
Spliceosome [BR:
ptru03041
]
Complex A
U2 snRNP components
U2 related factors
123520262
Complex B
123520262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123520262
NCBI-ProteinID:
XP_045138330
LinkDB
All DBs
Position
46:complement(10135973..10157235)
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AA seq
1104 aa
AA seq
DB search
MTRDSRRRRSRSRSRSPDRRRSRDRDRDRGRSRRSRSRDRDRDRDRHRSRSRDRRRSRSR
DRRSRSRSRDRDRDRDRKRSRSRSRDRDRDRDRDRKRSRSRSRERDRKRNKRSRTHSPPK
IKLLVDPPKPQEPVPVEPKEEEEVPLDFDPSKVDKEETEKRLEAEMQKRRERIEKWRAEK
KKRELEAAKKEAEKGTLGATVPKVSLKAWSLEDDEEEEEGENKEGNGNVEEEDEVDPLDA
FMSGIQEEVRKINRVDIRGGMKKGTKITVSSGTNVAAADPGTVKKPVIIMGVAKKANAKK
KGELMEQNQDALEYSSEEEGEDLKDTMASINSKGKKELGKVDHTVIEYVPFRKDFYVEVP
EIANMTKEEVDNYRAELEGIRIKGQGCPKPIKTWAQCGVSKRILDVLKKNNYEKPTPIQV
QAVPAIMKGRDVIGIAKTGSGKTLAFLLPMFRHVVDQPPLEDTDGPIAVIMTPTRELCMQ
IGKECKKFAKNNLRVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLR
RVTYVVLDEADRMFDLGFEPQVMRIIDNIQPSRQTVMFSATFPRQVEALAKKILTKPIEI
TVGGRSVVCKDVTQEVVILDEDQKFLKLLEVLGQFYERGQTLVFVDKQENADSLFRDLLS
HSYRALVLHGGVDQIDRDSTILDFKAGRVPILVATSVAARGLDVKQLILVVNFDAPNHYE
DYVHRCGRTGRAGNKGWAYTFLTQDQPRYAAEIVRALEISDNPIPPDLQKLYDEYKQKLE
GEGKKVKTGGGFHGKGFKFDESEANFASEKKKFEKAALGLADSDDEDIEHDIDQQIESML
NTKRTVKEIKGMANSSRRENNEGGLLLQQQVLSALHPLIWPLQINPMLLFPTPACAYPAP
EVSSSSDGLVGMPFGGPSASDKLELARKLAQRINLQHNIGKEAKGASQQAAEFILKGGAA
MQPTISAKTVAEQMAQKLNNKLNYQPRDDQEEEEETTEETHHKYEEELEINDFPQQARWR
VTSKEALAQISEYSEAGITVRGTFCPAGKNPPEGERKLFLAIESTSELAVSKAKAEIIRL
IREELVKLRTSAGPAKAQGRYKVL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggacagcagacgcaggcggtcccggtcccgctccaggagccccgaccggcga
cgctccagagacagagatcgtgatcgaggcaggtcacgacggtcccgatcgagagaccgt
gaccgtgaccgtgaccgccacagatcacgcagtagagaccgaaggagatcaaggtctcgg
gacaggcggtctaggtcaaggtcccgggacagagatcgggacagggacagaaagaggagt
aggagcaggtccagggacagggacagggacagggacagggacaggaagaggagcagaagc
agatccagggaaagggataggaagaggaataagaggagccgcactcattcacctcccaag
atcaagctccttgttgaccctccaaagccccaagaaccagtgcctgtagagcccaaggaa
gaagaggaagtgcctctggattttgatccatcaaaagtagataaggaggagacagagaaa
cgtcttgaagctgaaatgcagaagagacgggagcgaattgaaaagtggagagcagaaaag
aagaaaagggagctagaggcggcaaaaaaggaggctgagaagggtactttgggtgctact
gttccaaaagtatctctgaaagcatggagccttgaggatgatgaagaggaagaggagggt
gaaaataaagaaggaaatggaaatgtagaagaggaagatgaagttgatccactggatgca
ttcatgtcgggtattcaagaagaggttcgcaagatcaatcgtgtcgacatccggggagga
atgaagaagggcacaaaaatcactgtttcatcaggaactaatgttgcagcagcagaccct
gggactgtgaagaaacctgtcatcatcatgggtgtggcaaagaaggcaaatgccaagaag
aaaggagaattgatggaacagaaccaggatgctcttgaatattcctctgaggaggaggga
gaggacctgaaggataccatggctagcataaattcaaagggcaagaaggagcttggtaaa
gtggatcacacagtcattgagtatgtaccattcaggaaggatttctatgtggaggtgcct
gagattgccaatatgactaaggaggaagtggataactatagagctgagctggagggaatt
aggattaaaggtcaaggatgccctaaacctatcaagacttgggctcagtgtggagtcagc
aaaagaatattagatgttctcaaaaagaacaattatgagaagccaacacccatccaagtg
caggcagtccctgccatcatgaagggtagagatgtaataggcattgctaagactggttct
gggaagactttagctttcctgctgccaatgttccggcatgttgtggaccagccacccctg
gaagacacagatggacctattgctgttatcatgactcctacaagggaactgtgcatgcag
attggtaaagaatgcaagaagtttgctaagaacaacttgagggtgtgctgtgtgtatggc
ggtacagggatatctgaacaaatagctgagctgaagcgaggtgcagagatcattgtgtgt
actccgggacggatgatagacatgctggcagccaatggaggaagagtgactaacctacgg
agagttacctacgtggtgctggatgaggccgaccgcatgtttgacttggggtttgagcct
caggttatgaggataattgacaacatccagccgtctcgccaaactgtgatgttctcagca
acatttccaagacaggtagaagctctggcaaagaaaattttgacgaagcctatcgagata
acggttggtgggcggtcagtggtgtgcaaggatgtgacacaggaggtggtgattcttgat
gaagaccaaaagttcctgaagctgttggaagtacttggccagttttatgaacgaggacaa
actcttgtatttgttgacaagcaagagaatgcagattctctatttagggacctgttgagc
cattcttaccgggcattggtccttcatggaggtgtggaccagatagaccgtgacagtacc
atcctggactttaaggctggtcgagtacccatactggtagccacatcagtagcggctcga
ggtcttgatgtgaagcagctgattttagtagttaactttgatgctcctaatcactatgag
gactatgtgcatcgatgtggccgtacaggtcgtgcaggcaacaaaggctgggcttacacc
ttcctaacacaagaccaacctcgctatgctgctgaaattgtccgagctttggagatttct
gataatcccattccaccagacttgcagaaactttatgatgaatataaacaaaagttggaa
ggagaaggcaagaaggttaaaactggtggtggtttccatggtaaaggttttaaatttgat
gaatctgaagctaattttgcatcagaaaagaagaaatttgagaaggctgctcttggtttg
gctgactctgatgatgaagacattgaacatgacattgatcaacagattgagagcatgttg
aacacaaagaggacagtcaaagaaatcaagggaatggctaactcctctagaagggaaaac
aatgaaggagggctcctgcttcagcaacaagttctttcagccttacacccactaatatgg
ccacttcagatcaaccccatgttgctgttccccacaccagcatgtgcctaccccgcacca
gaggtgtcttcatcctctgatggtttagttggcatgccatttggtggcccctctgcttct
gataagttggaattagcacgcaaactggcacaacgcatcaaccttcaacacaacattggc
aaggaggctaagggtgccagtcagcaggcagcagagttcatccttaaaggtggagctgcc
atgcaacccaccatatctgccaagacagtagcagagcagatggctcagaaattaaacaac
aagctgaattatcagccacgtgatgaccaggaggaggaggaagaaaccacagaggaaact
caccataagtatgaagaagaacttgaaattaatgacttcccacagcaggccaggtggcga
gttaccagcaaagaagcactggcacagatttctgaatattcagaagctggaattactgtc
agaggaacattttgcccagcaggcaagaatccaccagaaggtgaacgcaagctgttcttg
gctattgaatctacatctgaattagctgtgtccaaagccaaagctgagatcatccggttg
atacgggaagaacttgttaagctacggaccagtgctggacctgccaaggcacagggccgg
tataaggttctctaa
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integrated database retrieval system
