Paraburkholderia terricola: CUJ90_05540
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Entry
CUJ90_05540 CDS
T05812
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pts
Paraburkholderia terricola
Pathway
pts03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ90_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_05540
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ90_05540
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUJ90_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
AAA_16
DUF6827
Motif
Other DBs
NCBI-ProteinID:
AXE91887
LinkDB
All DBs
Position
mHS1_A:1231698..1233791
Genome browser
AA seq
697 aa
AA seq
DB search
MSEQHLTEAGDTLDESKFVTFDGSPFQLYQPYPPAGDQPTAIETLVEGVEDGLAFQTLLG
VTGSGKTFTMANTIARLGRPAMVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVGTVSAIYGIGNPSEYHKMIL
TLRTGDRLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EVETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVIRAVETIKNELRERLEFFYSQGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDAIMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLAEINERVKAGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKVTDSMRRAIDETERRRAKQIAFNL
EKGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HARNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacatctgaccgaagccggggatacgctcgacgaatcgaaattcgtcacg
ttcgacggctcgccgttccagctgtatcaaccctatccgcccgccggcgaccagccgacc
gcgatcgagacgctcgtcgagggcgtcgaggacggcctcgcgttccagacgctgctcggc
gtgaccggctcaggcaagactttcacaatggcgaacaccatcgcgcggctcggccgcccg
gcgatggtgttcgcgccgaacaagacgctggccgcgcagctctactcggagtttcgcgag
ttctttccgcgcaacgcggtcgagtacttcgtctcgtactacgactactaccagccggaa
gcgtacgtgccgcagcgcgacctgttcatcgagaaggattcgtcgatcaacgagcacatc
gagcagatgcggctgtcggccaccaagagcctgatggagcggcgcgacgtggtgatcgtc
ggcacggtgtcggccatctacggtatcggcaatccgtccgaatatcacaagatgatcctg
acgctgcgcaccggcgacaggctcggccagcgcgacatcatcgcgcggctgatcgccatg
cagtacaaccgcaacgaagcggacttccagcgcggttcgttccgggtgcgcggcgacacg
atcgatattttcccggccgaacacgcggaaatggcggtccgcgtcgaattgttcgacgac
gaagtcgaaacgctgcagctattcgacccgctcaccggccgcgtgcgccagaagattccg
cgctttaccgtctatccgtcgtcgcactatgtgacgccgcgcgacaccgtgatccgcgcc
gtcgaaacgatcaagaacgaacttcgcgaacggctcgaattcttctatagccaaggcaag
ctggtcgaagcgcagcggctcgagcagcgcacccgcttcgatctggaaatgctgcaggaa
ctcggtttctgcaagggcatcgagaattactcgcggcacttctcgggcgcggcgcccggc
gagccgccgcccacgctggtcgactacctgccgccggacgcgatcatgctgctcgacgaa
tcgcacgtgctgatcggccagctgaacggcatgtacaacggcgaccgcgcgcgcaaggag
aacctggtggactacggcttccgcctgccgtccgcgctcgataaccggccgctcaagttc
aacgagttcgagcgcaagatgcgccaggtggtgttcgtgtcggccacgccggcggactac
gaaaagaaaacggcgggacaggtcgccgagcagttggtgcgtcctaccgggctcgtcgac
ccggaaatcgaggtgcggccggcgcgttcccaggtcgacgacgtgctcgccgagatcaac
gagcgcgtcaaggcgggcgaccgcgtgctggtcacggtgctgaccaagcggatggccgag
cagctcacggagtttctggccgaccacggcgtcaaggtgcgctatctgcacagcgacatc
gatacggtggagcgggtcgagatcatccgcgatttgcgcctgggcaccttcgacgtgctg
gtggggatcaacctgctgcgtgaagggctggatattccggaagtctcgctggtcgcgatt
ctcgacgcggacaaagagggcttcctgcgcgccgagcgctccctgatccagaccatcggc
cgggcagcgcgcaacgtgaacggcaaggcgattctctacgcggacaaagtcaccgactcg
atgcgccgcgccatcgacgaaaccgaacggcggcgcgcgaagcagatcgcgttcaacctc
gaaaaaggcatcacgccgcgcggggtggtgaagcgcatccgcgacattatcgacggcgta
tacaacgtcgatgacgcccgcgccgaactgaaggaacagcaaacccgcgcgaaattcgaa
gacatgtccgagaagcagctcgccaaggaactcaagcgtctcgaaaagcagatgatggag
cacgccaggaatctcgagttcgaaaaggccgcgcagacccgggatcaactggccttgctg
cgccaacgtgtgtttggagccaacgtgggcgatcacgtgtccggtgtcgaataa
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integrated database retrieval system
