KEGG   Pseudoalteromonas tunicata: PTUN_a0922
Entry
PTUN_a0922        CDS       T05187                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
ptu  Pseudoalteromonas tunicata
Pathway
ptu03030  DNA replication
ptu03430  Mismatch repair
ptu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTUN_a0922 (holC)
   03430 Mismatch repair
    PTUN_a0922 (holC)
   03440 Homologous recombination
    PTUN_a0922 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptu03032]
    PTUN_a0922 (holC)
   03400 DNA repair and recombination proteins [BR:ptu03400]
    PTUN_a0922 (holC)
Enzymes [BR:ptu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PTUN_a0922 (holC)
DNA replication proteins [BR:ptu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PTUN_a0922 (holC)
DNA repair and recombination proteins [BR:ptu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PTUN_a0922 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: ATC93632
LinkDB
Position
I:complement(828560..829000)
AA seq 146 aa
MNAIFYVQKQENEPDSPIAAHFDLAAKIAADCYRQGQRVFIYTENKTDAHLIDEYLWQFE
ANSFVPHNLQGEGPHNGAPVEIGDSTPVGNRKILINLALHVPDFIRRFNQVYDFVPFQEE
QKQAARERYKQLRQLGANISTIDIEH
NT seq 441 nt   +upstreamnt  +downstreamnt
atgaacgctattttttacgttcaaaaacaagaaaatgagccggatagtcctattgcggct
cattttgatctggctgctaaaattgcagccgattgttatcgccaaggtcagcgggttttt
atttatactgaaaataaaaccgacgctcacctaatcgatgaatacctgtggcaatttgaa
gcaaacagctttgtgccacacaatttacagggcgaagggcctcataatggtgcccctgtc
gaaattggtgattcaacgccggttggcaaccgaaaaatactgattaatttggcgttacat
gtgccagattttattcgacgatttaatcaagtgtatgattttgtgccatttcaagaagag
caaaaacaagctgctcgtgagcgttataagcaattacgccaacttggtgccaacatttca
acaattgatattgaacattaa

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