Pandoraea thiooxydans: ABW99_01225
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Entry
ABW99_01225 CDS
T03947
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptx03000
]
ABW99_01225
Transcription factors [BR:
ptx03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABW99_01225
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
AAA
Mg_chelatase
DUF815
HTH_23
IstB_IS21
HTH_30
RWP-RK
HTH_29
AAA_7
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AKJ67054
UniProt:
A0A0G3EM37
LinkDB
All DBs
Position
complement(1073441..1074574)
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AA seq
377 aa
AA seq
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MPAHLAVAASRSPSATPSASPYLPIDLLCGVDAAMQHLIARGKRFIDRGLPVLILGETGT
GKEYLARALHSYSQRRARAMVAINCASIPEHLIESELFGYARGAFSGALPGGMKGRIQQA
DGGTLFLDEIGDMPLALQTRLLRVLSEREVTPLGSSAPVPVDVQLICATHQDLPELVAQG
RFREDLYYRIAVGVLRLPPLRERTDFTTVLARMLADELQEPGESDELGDAVDTARLIAPD
ALEVLARHRWPGNLRQLKTAVRYACAVMSGPRVELRDLPAELLAGGIVECSPAQLPSQSP
RAMPLHAARSDCAQDGPPLSERERVLHALTASRWNISAAARTLGVCRASLYRKLKQLRIP
HMRDCASELVVLHGANA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccagctcatctcgccgtagctgcctcacgctcgcctagcgccaccccatccgcttcc
ccttatttgccgatcgatttgttgtgcggcgtcgatgccgcgatgcaacatctgattgct
cgcggcaagcgcttcatcgatcgcggcctgccggtgctcatcctcggggaaaccggcaca
ggcaaggaatatctggcccgcgcgctgcacagctatagccagcgccgggcgcgcgcgatg
gtagcgatcaattgcgcctcgattcccgagcatctgatcgaaagcgaattgttcggctat
gcgcgcggcgccttctccggcgccctgcccggcggcatgaaaggacgcattcagcaagcc
gacggcggcacactgtttctcgacgaaatcggcgatatgccgctggcgctgcaaacgcgc
ctgctgcgcgtactgtcggagcgcgaagtcacgccgctgggcagcagtgccccagtgcct
gtcgacgtgcaattgatctgcgcgacccaccaggatttacccgagctggttgcccagggc
cgctttcgcgaggatctctactatcgaatcgcagtgggcgtgctgcgcttgccgccactg
cgcgagcgaaccgatttcacgacggtgctggcgcgcatgttggccgacgaactgcaggag
ccaggcgaatcggacgagcttggcgacgccgtcgacacggcacggctgattgccccggat
gcgctcgaggtactggcgcggcatcgctggcccggcaatctgcgccagttgaagaccgcg
gtccgctacgcatgcgcggtgatgagcggcccacgcgtcgaactgcgcgatttgccggcc
gaattgctggcgggaggtatcgtcgaatgcagcccggctcagctgccgagccaatcgccg
agggcgatgccgctgcatgcggcgcgctcggattgcgcccaggacggcccccccctctcg
gagcgcgagcgtgtgctgcatgcattgacagccagtcgctggaatatttccgctgcggcc
agaacgctcggcgtgtgccgggcctcgctctaccgcaagctcaagcagttgcgcattccg
cacatgcgcgattgcgcgagcgaattggtcgtgctgcacggcgcgaacgcgtag
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