Pandoraea thiooxydans: ABW99_16890
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Entry
ABW99_16890 CDS
T03947
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptx03032
]
ABW99_16890
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_16890
Enzymes [BR:
ptx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABW99_16890
DNA replication proteins [BR:
ptx03032
]
Prokaryotic type
DNA Topoisomerases
ABW99_16890
DNA repair and recombination proteins [BR:
ptx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABW99_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKJ69634
UniProt:
A0A0G3EUD2
LinkDB
All DBs
Position
complement(4458825..4461305)
Genome browser
AA seq
826 aa
AA seq
DB search
MSEQQNPQADTSSTSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID
EALAGYCDDILVTIHADNSISVLDNGRGVPTGIKFDDKHEPKRSAAEIVMTELHAGGKFD
QNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKHFMEFHRGIPQERIVEEQNGVQVSP
LKIIGDTDKRGTEVHFLADETIFGNVEFHYDILAKRMRELSFLNNGVRIRLVDQRTGKED
DFAFAGGVKGFVEYINKNKAVLHPNIFHVIGERDGIGVEVAMQWNDSYNENVLCFTNNIP
QRDGGSHLTGLRAAMTRVINKYIEEHELAKKAKVETAGDDMREGLTCILSVKVPEPKFSS
QTKDKLVSSEVRAPVEEYVAKALEEFLQETPNDAKIICGKIIEAARARDAARRAREMTRR
KGVLDGVGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVE
KARFDKLISSEQIVTLITALGCGIGKDDYNIDKLRYHRVIIMTDADVDGAHIRTLLLTFF
YRQVPELIERGYIYIAQPPLYKIKHGKEERYIKDESELNAHMLRLALNGAELLPNTGATP
ITGEALGELARSYLLAEAVTGRVGHVIDAAALGAITDGIEIHLDSQDAAEASAKALEAAL
NGDPLKPEITVRATYDDVREAHALRIERRRHGNVKVSVLDDDFVQSADYRQLTTTAQTFK
GLIGEGATIKRGERSQAVTDFKSAMRWLLADAERNVSKQRYKGLGEMNAGQLWETTMDPS
VRRLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIETNALRAGNIDV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagcaaaacccgcaagccgacaccagctcgaccagctacggcgcgtcgtcg
attcaaatcctcgaaggactcgaagcggtgcgcaagcggccaggcatgtacatcggcgac
acttccgacggcaccggcctgcatcacctcgtgttcgaagtgctcgacaactccatcgac
gaagcactcgccggctactgcgacgacatcctcgtcaccatccacgccgacaactccatt
tccgtgctcgacaacgggcgcggcgtgcccaccggcatcaagttcgacgacaagcacgaa
cccaagcgcagcgcggccgaaatcgtcatgaccgaactgcacgccggcggcaagttcgac
cagaacagctacaaggtctccggcggcctgcacggcgtgggcgtgtcgtgcgtcaacgcg
ctctcgagctggctgcgcctgaccgtgcggcgcgacggcaagaagcacttcatggaattc
catcgcggcatcccgcaggagcgcatcgtcgaggagcagaacggcgtgcaggtctcgccg
ctcaagatcatcggcgacaccgacaagcgcggcaccgaagtgcacttcctggctgatgaa
accatcttcggcaacgtcgaattccattacgacatcctcgccaaacgcatgcgcgaactg
tcgttcctcaacaacggcgtgcgcatccgtctggtcgaccagcgcaccggcaaggaagac
gacttcgccttcgccggcggcgtcaagggcttcgtcgaatacatcaacaagaacaaggcg
gtgctgcaccccaacatcttccacgtcatcggcgagcgcgacggcatcggtgtggaagta
gcaatgcagtggaacgacagttacaacgaaaacgtgctgtgcttcaccaacaacatcccg
cagcgcgacggcggctcgcacctcaccggcctgcgcgcggccatgacgcgggtcatcaac
aaatacatcgaagagcacgagctcgccaaaaaagccaaggtcgaaaccgctggcgacgac
atgcgcgaaggcctcacctgcatcctgtcggtgaaagtgcccgagcccaagttttcttcg
cagaccaaagacaaactcgtctcgtcggaagtgcgcgcgccggtcgaggaatacgtcgcc
aaggcgctcgaagaattcttgcaggagacgcccaacgacgccaagatcatctgcggcaag
atcatcgaagccgcccgcgctcgcgacgccgcgcgccgcgcccgtgaaatgacgcgccgc
aaaggcgtgctcgacggcgtgggtctgcccggcaagctcgccgactgccaggagaaagac
ccggcactgtgcgaaatctacatcgtcgagggtgactccgccggcggctccgccaagcag
ggccgcgaccgcaaattccaggccatcctgccgctgcgcggtaaggtgctcaacgtcgag
aaggcccgcttcgacaagctcatctccagcgagcagatcgtcacgctcatcaccgcgctc
ggctgcggtatcggcaaggacgactacaacatcgacaagctgcgctaccaccgcgtcatc
atcatgaccgatgccgacgtcgacggcgcgcacatccgcaccctgctgctcaccttcttc
taccgccaggtgcccgaactcatcgagcgcggctacatctacatcgcccagccgccgctc
tacaaaatcaagcacggcaaggaagagcgctacatcaaggacgagtccgagctcaacgcg
cacatgctgcgcctcgcgctcaacggcgccgaattgctgcccaacaccggcgccacccca
atcaccggcgaagcgctgggcgaactcgcgcgcagctacctgctcgccgaagccgtcacc
gggcgcgtcggccacgtcatcgacgcggccgcgctgggcgccatcaccgacggcattgaa
atccacctcgacagccaggatgccgccgaagcctccgccaaggcgctcgaagccgccctc
aacggcgacccgctcaagcccgagatcaccgtgcgcgccacctacgacgacgttcgcgaa
gcccacgcgctgcgcatcgaacggcgccgccacggcaacgtcaaggtcagcgtgctcgac
gacgacttcgtgcaatcggccgactaccgccagctcaccaccaccgcgcaaaccttcaag
ggcctcatcggcgaaggcgccaccatcaagcgcggcgagcgctcgcaagccgtcaccgac
ttcaagagcgccatgcgctggctgctcgccgacgccgagcgcaacgtcagcaagcaacgc
tacaaaggcctcggcgaaatgaacgccggacagctgtgggaaaccaccatggaccccagc
gtgcgccgcctgctgcgcgtgcaaatcgaagacgccatcgccgccgacggcattttcacg
accctcatgggcgacgacgtcgaaccgcgccgcgcgttcatcgagacgaatgcgttacgg
gcggggaatattgatgtttga
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