Pandoraea thiooxydans: ABW99_20185
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Entry
ABW99_20185 CDS
T03947
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptx03000
]
ABW99_20185
Transcription factors [BR:
ptx03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ABW99_20185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_IclR
HTH_17
HTH_24
HTH_31
HTH_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AKJ70184
UniProt:
A0A0G3EVY4
LinkDB
All DBs
Position
complement(680221..680730)
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AA seq
169 aa
AA seq
DB search
MTFKPAQAALEQAGFPAALPVGELARRSGVSVSTLHFYETKGLISSHRTAGNQRRYARDV
LRRVAFIRVAQRVGIALADIQAALATLPANAAPSRADWARLSRGWRAALNERIEQMEKLR
DTLDDCIGCGCLSIDRCRLRNPLDRLGAQGSGPRRLWVTHQGEAGKRPT
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaacctgcccaggcggcgctcgaacaagccggctttcctgccgcgctgccg
gttggcgagctcgcgcgccgcagcggcgtatcggtgtccacgctgcatttctacgagacg
aaagggctaatcagcagccaccgaacggcgggtaaccagcgccgctacgcgcgcgacgta
ctgcggcgcgtggcattcattcgcgtggcgcaacgcgtgggcattgcactggccgacatc
caggcggccctggccaccctgcccgccaatgccgcgcccagccgggccgactgggcgcgc
ctgtcccgcggatggcgcgccgccctgaacgagcgcatcgaacaaatggagaaactgcga
gacaccctcgacgactgcattggctgcggctgtttgtcgatcgaccgatgccggttgcgc
aacccgctggaccggctcggcgcgcagggctcggggccccgacgcctgtgggtcacgcac
cagggcgaggcgggcaagcgcccgacatag
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