Pseudomonas tensinigenes: HU718_002470
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Entry
HU718_002470 CDS
T07620
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz00521
Streptomycin biosynthesis
ptz00523
Polyketide sugar unit biosynthesis
ptz00541
O-Antigen nucleotide sugar biosynthesis
ptz01100
Metabolic pathways
ptz01110
Biosynthesis of secondary metabolites
ptz01250
Biosynthesis of nucleotide sugars
Module
ptz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HU718_002470 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU718_002470 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU718_002470 (rfbC)
Enzymes [BR:
ptz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU718_002470 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QXI06577
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All DBs
Position
complement(563786..564331)
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AA seq
181 aa
AA seq
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MNVITTDLPGVLIIEPKVFGDERGFFYESFNAKAFQNATGLDTQFVQDNHSRSQKGVLRG
LHYQLQNTQGKLVRVTVGEVLDVAVDIRRSSPHFGKWVAVRLSADNHRQLWVPEGFAHGF
VVLSEFAEFLYKTTDYYTPSAERSIRWDDPDLAIDWQLDEAPKLSAKDQAAAFFKDADVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatcaccaccgacctgcccggtgtcctgatcatcgaacccaaggtgtttggt
gacgaacgcgggtttttctacgaaagtttcaatgccaaggctttccagaacgcaacgggg
ctggacacgcaattcgttcaggacaaccactcgcgctcgcaaaaaggcgtattgcgtggt
ctgcattaccaactgcaaaacacccagggcaaactggtccgcgtaactgtcggtgaagta
ttggatgtcgccgtggacattcgccgcagctcaccgcacttcggtaaatgggtggccgtg
cgcctgtcggcagacaaccaccgtcagttgtgggtcccggaaggtttcgcccacggcttc
gtcgtgctgagcgagttcgccgaattcctctacaagaccaccgattactacactccgtcg
gcagaacgcagcattcgctgggacgatccggatctggccatcgattggcaactggacgaa
gccccgaagctgtccgccaaggatcaggctgcagccttcttcaaggacgctgacgtcttc
gcctga
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