Panthera uncia (snow leopard): 125928214
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Entry
125928214 CDS
T08832
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
puc04121
]
125928214
Enzymes [BR:
puc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125928214
Ubiquitin system [BR:
puc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125928214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125928214
NCBI-ProteinID:
XP_049494773
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All DBs
Position
E3:complement(26556257..26563558)
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AA seq
768 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLAEGGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGAGTGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDSNLAELEAARMTEKEA
LARLREQAARVGMQVEEVAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLEELEGREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGPAPCLLPQLEFHPGLLD
KNCRLLGLSFEEQPQKDGGQEGAGSQGGDETSSQREDGAKSERHGGIQPQSRAGACTPDR
AQTPQEDGAQTPKEDRAKTPQEDGAQTPKEGRAQTPLEDEGAQTPRGGRSNKKRKFKGRL
KSVSREPSPVPGLNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQ
NRALKRFSLNGDYKGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRALSL
SQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGN
FVGSDWQQNSVVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDP
KGSLLGDFLTAYHGLEKPRVTTMVDGRHLVVSLSNGTIHVFRVRSLDS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctcaccctccctactggaagccctgagcagcgacttcctggcc
tgtaaaatatgcctggagcagcttcgggcacccaaaacgttgccctgcctgcacacctac
tgccaggactgcctggcccagctggccgagggaggccacctccgatgccctgagtgccga
gagaccgtgcccgtgccaccggcaggcgtggccgccttcaagaccaacttctttgtcaac
gggctcctggatttggtgagggcccgggctggcggagacctgcgcgcggggaagccagcc
tgcgcgctgtgtcccctgatggggggggccggcacgggggggccggccactgcccggtgc
ctggactgcgcggacgacctgtgccaggcctgcgctgacgggcaccgctgcactcggcag
acccacacccaccgggtggtggacctggtgggctaccgggcaggctggtacgacgaggag
gcccgggagcgccaggcggcccagtgccctcagcacccgggagaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgcgagtgccgcctggacccccacctggaccat
ccctgcctgcccctggccgaggctgtgcgcgcccgcaggccaggcctggaggagctgttg
gcaggcgtggacagcaacctggcggagcttgaggccgcccggatgacggaaaaggaagct
ttggcccggctgcgggaacaggcagctagggtgggaatgcaggtggaggaagtggccgag
ggggtcctccgggccctactagcccagaagcaggaggtgctggggcagctacgggcccac
gtagaggctgctgaggaggctgctcgggagagactggaggagctggagggccgggagcag
gtggccagggcggcggccgcctttgcccgtcgggtgctcagcttgggtcgcgaggccgag
atactttctctggaaggggcgattgcccagaggctccggcagctgcagggctgtccctgg
atgccagggccagccccctgcctgctgccccagctggagttccatcctgggctcctggac
aagaactgccgcctgctagggctctcctttgaggaacagccccagaaggacggtgggcaa
gaaggagctggaagccagggaggtgatgaaacttcgagccagagagaggacggagccaag
tcagagagacacggtggaatccagccccagagtagggctggagcttgcaccccagacaga
gcccagacaccccaggaggacggagcccagaccccaaaggaggacagagccaagacaccc
caggaagacggagcccagactccaaaagagggcagagcccagacacccctagaagatgaa
ggagcccagaccccgaggggtggcagatccaacaagaagaggaagttcaaaggcaggctc
aagtcagtttcccgggagcccagcccagtgcctgggctgaacctggagggctctggcctc
ctccccaggcccattttctcctgcagcttccccacgcggatgccaggagacaagcggtct
ccccgcatcacagggctctgtccctttggcccccgggagatcctggtggcggatgagcag
aatagggcgttgaagcgcttctccctcaatggcgactacaagggcgcagtgccggtcccc
gagggctgctccccatgtagcgtggctgccctgcagggagcagtggccttctcggccggc
gcgaggctctacctcatcagccctgatggtgaggtgcagtggcgccgggccctgagcctc
tcccaggccagccacgctgtggctgccatgccgagtggggaccgtgtggccgtcagtgtg
tcaggccacgtggaagtgtacaacatggaaggcagcctggccacccggttcatccctggg
ggcaaggccaacaggggcctgcgggcgctggtgttcctgaccaccagcccccagggcaat
tttgtggggtccgactggcagcagaacagcgtggtggtctgtgatggtctgggtcaggtg
attggtgagtaccgggggccaggcctgcatggctgccagccaggctctgtgtccgtggat
aagaaaggctacatcttcctgacccttcgcgaggtcaacaaggtggtgatcctggatcca
aaggggtcactgctcggcgacttcctgacggcctatcatggcctggaaaagcctagggtg
accaccatggtggacggcaggcacctggttgtgtctctcagtaacgggaccattcatgtc
tttcgggtccgctctcttgatagttaa
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