Pusillimonas sp. DMV24BSW_D: G9Q38_06985
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Entry
G9Q38_06985 CDS
T06486
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pud
Pusillimonas sp. DMV24BSW_D
Pathway
pud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9Q38_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pud03019
]
G9Q38_06985
Enzymes [BR:
pud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G9Q38_06985
Messenger RNA biogenesis [BR:
pud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G9Q38_06985
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIM50484
UniProt:
A0A6G8IBC8
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All DBs
Position
1444052..1445359
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AA seq
435 aa
AA seq
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MLKAVAATGYTSPTPIQAQAIPVVMQGRDVMGAAQTGTGKTAAFTLPILHRLMSVANSSA
SPARHPVRALVLTPTRELADQVADNVSTYGASTPLRSAVVFGGVDINPQRDALRRGCEVL
IATPGRLLDHVEQKNVNLGQVGILVLDEADRMLDMGFLPDLDRIVRLLPAQRQTLLFSAT
FSNEIRKLGRSWLKDPVEIEVAARNATAENVTQIAYPLGGNDKRLAVTHLVKSRGLNQVI
VFCNTKIGTSRLARQLDLDGIRSESIHGDKSQLERMKALEAFKAGKLEVLVATDVAARGL
DVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFAPDEERFLLDIEKLIKKKIP
RGTLDLPTPARRSSSSSAYESRGRHRDSSRSRAPVDDFFSRPYVAANVEAKPRLPTHTSD
TKNTRKSVGVLLGGR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atccttaaagcggtagcagcaacgggatacacatcccccactccgattcaggcgcaagcc
attcccgttgtaatgcaaggccgcgatgtaatgggtgcagcccaaaccggcacaggcaaa
accgctgcatttacactacctattctgcaccggcttatgtcggttgccaattccagcgca
tcgccggcgcgccacccggttcgcgcattggttttaacgcccactcgggagttggccgat
caagttgccgacaacgtttcaacatacggtgcttcaacaccattgcgttcggcagtcgtt
tttggtggtgttgatatcaacccgcagcgcgatgcattgcgtcgaggttgtgaggtgtta
attgcgacgcctggtcggttgcttgaccatgtagaacaaaagaacgtgaacctcggtcag
gtcggcattcttgtgctcgatgaagcggatcggatgttggatatgggttttctgcccgat
ctcgatcgtatcgtgcgtctgttgcctgcgcagcgtcaaacgctattgttttccgccaca
ttcagtaatgagattcgcaagctgggtcgcagttggttgaaagatcctgttgaaattgag
gttgcagcgcgtaatgcgacagcggaaaatgtaactcaaattgcctatccgctggggggt
aacgataagcggttggcagtgacgcaccttgtgaagtcgcgcggcctgaatcaggtgatt
gtgttttgcaatacgaaaatcggtaccagccgcttggcccgccagcttgatctcgacggt
attcgttcagaatccatccatggcgacaaaagtcagcttgagcgcatgaaggcgcttgag
gcgttcaaggcgggtaagcttgaggttttggtggccacagatgtcgcggcgcgtgggctc
gacgttgcaggtgtgccttgtgtcattaattacgacttaccttacaacgcggaagattac
gtgcatcgcatcgggcgtaccgggcgtgccggagcctcgggcgaggccatcgcactcttt
gcacctgatgaagagcgctttttgcttgacattgaaaagctgattaaaaagaaaattccg
cgtggcaccctagatttgccgacgccggcgcgtcgatcttcttcctcttctgcatacgag
agccgtggccgccatcgtgatagcagccgttctcgtgcacctgtggatgattttttctcg
cgcccgtatgttgccgcaaatgttgaagccaagccacgtttacccacccataccagcgat
actaaaaatacccgcaaatcggtaggtgttttgttgggtgggcgttag
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