Pseudomonas umsongensis: HGP31_08080
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Entry
HGP31_08080 CDS
T06842
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pum03009
]
HGP31_08080 (rluB)
Enzymes [BR:
pum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HGP31_08080 (rluB)
Ribosome biogenesis [BR:
pum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HGP31_08080 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QJC78269
LinkDB
All DBs
Position
1781685..1782902
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AA seq
405 aa
AA seq
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MSIKDQKDDQEIGPAGEKLQKVLARIGVGSRRDVEAWISHGRIKVNGKDATLGQRVDMHD
AITIDGKVIKREEAAEAVRRVIMYNKPDGEICTRVDPEGRPTVFDKMPRPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAK
FTDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDILSAEVGLAPVAMPQMNAKSKDKLDRMQRKSSRPMAKTERVRTLRPATG
AAAPASPRANREPQIEGERPARKPAARQDGERGPRTPRPANGRTERGEGRGTPVADRPAD
TKRPAKPASKRPGISLVEGDKPSGKRRGAPAGSGQRPGFGRRKPE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaagaccagaaagacgaccaggaaatcggcccagcaggcgaaaaactgcag
aaagtcctcgcccgtatcggcgtcggctcgcgccgtgacgtggaagcctggatcagccac
ggccggatcaaggtcaacggcaaagacgccacccttggccagcgcgtcgacatgcacgac
gccatcaccatcgatggcaaggtgatcaagcgtgaagaggccgccgaggcggtccgccgc
gtgatcatgtacaacaagcccgatggcgaaatctgcacccgcgtcgacccggaaggccgt
ccgaccgtgtttgacaagatgccgcgtccgaaagaaggtcgctggatcaacatcggtcgc
ctggacatcaacaccaccggcctgctgatgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccttcctacgaaatggaccgtgaatacgcggtacgtgtgcgtggcgaagtc
gacgacgagatgatcgagcgtctgaaagctggcgtggtcctcgaagacggcccggccaag
ttcaccgacatcaagcaagcgccgggcggcgaaggtttcaaccactggtaccactgcgtg
gtgatggaaggtcgcaaccgcgaagttcgtcgcctgtgggagtcccagggcctggtggtc
agccgtctgaagcgcgtgcgttttggtccggtgttcctcaattcggacctgccgatgggc
cgctggcgtgaaatgagccagtacgaagtcgacatcctgagtgccgaagttggcctggcg
ccggtggcgatgccgcagatgaacgccaagagcaaagacaagcttgaccggatgcagcgt
aaatcgtcgcgtccaatggccaagaccgagcgcgtacgtaccctgcgtccagccactggt
gccgccgcaccggcctcgccgcgtgccaaccgcgaaccgcagatcgaaggcgagcgtcca
gcacgcaagccagccgcccgtcaggacggcgaacgcggtccacgcacaccacgtccggcc
aatggccgtaccgagcgtggcgaaggtcgtggtacgccggtagccgatcgtccagccgac
accaagcgcccggccaagccggcatcgaagcgtccaggcatcagcctggtcgagggtgac
aagccgtcgggcaagcgccgcggcgcgccggcgggttccggccagcgtccggggtttggt
cgtcgtaagccggagtaa
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