Pseudomonas umsongensis: HGP31_08995
Help
Entry
HGP31_08995 CDS
T06842
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00521
Streptomycin biosynthesis
pum00523
Polyketide sugar unit biosynthesis
pum00541
O-Antigen nucleotide sugar biosynthesis
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01250
Biosynthesis of nucleotide sugars
Module
pum_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HGP31_08995 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HGP31_08995 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HGP31_08995 (rfbC)
Enzymes [BR:
pum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HGP31_08995 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJC78442
LinkDB
All DBs
Position
complement(1976238..1976783)
Genome browser
AA seq
181 aa
AA seq
DB search
MQGVQLAIPEVVLITPKVFGDERGFFYESFSAGAFYEATDVKPSFVQDNHSRSVKGVLRG
LHYQLPPHAQGKLVRVVQGEVFDVAVDIRRTSPTFGQWVGEILSADNKRQLWIPTGFAHG
FITLSDTAEFLYKTTDVYTPSCERCIMWNDPAIGIDWGYDGEPILSGKDQLGVLLANAEV
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcgttcaactggcgattccagaagtcgtattgattactcccaaggtgtttggg
gatgagcgcggattcttctatgagagctttagcgcgggtgccttttatgaggctacggat
gtcaagcccagctttgttcaggacaatcattccaggtcggtaaagggtgttctgcgcgga
ctgcactaccaactcccccctcacgcacaaggcaagctggtacgagttgttcaaggcgaa
gtctttgatgtggcggtggatatccgccgtacatcccctacatttggccaatgggtaggt
gagattctttctgccgacaacaaacggcagctatggattccaactggattcgcccacggg
tttatcaccttgagtgatacggctgaattcctctacaaaacaaccgatgtctacacgcca
tcttgcgagaggtgcataatgtggaacgaccctgcaattggcatcgattggggatatgac
ggcgagcctatcttgtctggaaaggaccagcttggtgtcttactcgccaacgccgaagtc
ttttga
DBGET
integrated database retrieval system