Pseudomonas umsongensis: HGP31_12505
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Entry
HGP31_12505 CDS
T06842
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pum03000
]
HGP31_12505
Transcription factors [BR:
pum03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HGP31_12505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_23
Rrf2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QJC79091
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Position
2724884..2725903
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AA seq
339 aa
AA seq
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MLQLTESERPRPPMLRIGFWLTEAFDMYTLANALEPLRLANQLAGYDVCQWQMLSLDRQQ
LNASNGIATAAARLGQWQPFDVLILCGGDNLRLDPDMRQQLSHWAAQPISLGALGEAGWL
LAQIGALEGVRCSLPKPAASLEFAAFSKLTPVAAPFCVDRQRLTCVGPQAVQGLMHELLA
RYHGRGLILRMAKHAARQARPLLPVQDAPEKLQATLALMSEHLSRTLGIDELAETMGISR
RHLERLFKRSLGCSPSRHYLDLRLQQARQLLHAGERSLSDVARACGFVSLQHFFRCYRQY
FGAHPRDHMGVKAPSQRASMLNAPASSRAVPVVLPSFPH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattgactgaatccgaacggccacgaccgccgatgctgcgtattggcttctgg
ttgacggaagcctttgatatgtacaccttggccaatgcactggagccactgcgcctggcc
aaccagttggcagggtacgatgtttgccagtggcaaatgctgagcctggacagacagcaa
ctgaacgccagtaacggcatcgcaaccgccgccgctcgactgggtcagtggcaaccgttc
gatgtgttgatcctctgtggtggcgataacctgcgtcttgatccagacatgcgccagcag
ttgagccactgggcggcgcaaccgatcagcctcggggcattgggcgaggcaggctggctg
ctggcgcaaattggtgccctggagggtgtccgttgcagcttgccaaagcccgctgcatca
ctggagtttgccgctttcagcaagttgacaccggtggctgcgccgttctgcgtcgaccgc
caacgcctgacgtgtgtcggcccgcaggctgttcaagggttgatgcacgagcttctcgca
aggtaccacggtcgtggcttgatactacggatggcaaagcatgcagcacgccaggcccgg
cccctactgcccgtgcaggatgccccggaaaaacttcaggcaaccctggctttgatgagc
gagcacttgagccgaacgctgggtatcgatgaactggccgagaccatgggcatttcccgt
cgccatctggagcggctgttcaagcgtagcctgggttgttcgccatcccgacactacttg
gacttgcggcttcaacaggcgcggcagttgttgcatgccggcgagcggtcgctgtcggat
gtcgccagggcgtgcggtttcgtctcgctgcaacatttctttcgctgctatcgccagtac
ttcggtgcgcatcctcgcgaccatatgggggtgaaggcgccgagtcagcgggcatcaatg
ttgaatgcgccggcctcatcgcgagcagttccagtcgtcctgccgtcgttccctcactga
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