Polaribacter undariae: NQP51_09280
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Entry
NQP51_09280 CDS
T08505
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pun
Polaribacter undariae
Pathway
pun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQP51_09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pun03019
]
NQP51_09280
03016 Transfer RNA biogenesis [BR:
pun03016
]
NQP51_09280
Enzymes [BR:
pun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NQP51_09280
Messenger RNA biogenesis [BR:
pun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQP51_09280
Transfer RNA biogenesis [BR:
pun03016
]
Prokaryotic type
tRNA degradation factors
NQP51_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
SLS1_N
Motif
Other DBs
NCBI-ProteinID:
UWD30335
LinkDB
All DBs
Position
2243306..2245540
Genome browser
AA seq
744 aa
AA seq
DB search
MIPKVFREVIDLGDGRTISLETGKLAKQAHGSVVVQMGKAMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAEVQVMIQLMS
HDEDVMPDALAGLAASAAIQLSDFPFECPISEARVGRVNGEFVINPTRAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMAEAIKFAHEAIKIQCAAQVKLAEAFGKKETRIYQGERE
DEELAAKINDFCYDKCYAIAKKGTSKVERTTAFAEVKEELKASFTEEELADYGDLVSKYF
NKSQKVAVRELTLSEGLRLDGRKTDEIRPIWCEVDYLPSVHGSSIFTRGETQALATVTLG
TSRDAMKIDMPSYEGEENFYLHYNFPPFCTGEARPLRGTSRREVGHGNLAQRGLKGMIPA
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQMIRPVSGIAMGLISDGDRYAVLS
DILGDEDHLGDMDFKVTGTSEGITACQMDIKVKGLGYEILVNALKQAREGRLHILGKITD
TIAGANIEVKAHAPKMVNRRIPNELIGAFIGPGGKNIQELQKETETTIVITEDPVTEEGI
IEILGTKPEGIEAVIAKIESMMFKPEKGSVYEVKVIKMLDFGAVVEYIEAPGNEVLLHVS
ELAWERTDNVSDVVKMGDILDVKYFGLDPRTRKEKVSRKAILPKPEGFVERPPRDDKRSG
GRDNRSRDNRGRDDRKPREPRKEE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttagagaggttatagaccttggagatggaagaactatctcatta
gaaaccggtaaattagcaaaacaagcgcacggttctgttgttgttcaaatgggtaaagca
atgttattatgtactgtagtttctaactacaaacaatctgacgttgattttttaccactt
acagtagattatagagaaaaatttgcagctgcaggtagatatccaggtggtttctttaaa
agagaagcaagaccaagtgatggagaagtattaacaatgcgtcttgtagaccgtgtttta
cgtcctttattcccaaaagattatcacgcagaagtacaagtaatgatccaattaatgtct
catgatgaagacgttatgccagatgcattagcaggtttagcagcgtcagcagctattcaa
ttatcagattttcctttcgaatgcccaatctctgaagcaagagtaggtagagtaaacgga
gaatttgtaataaacccaacaagagcacaattagcagaatctgacatcgatatgatgatt
ggagcttctgcagattctgtaatgatggttgaaggtgaaatggatgaaatttctgaagaa
gaaatggcagaagcaattaaatttgcacatgaagctattaaaattcagtgtgctgctcaa
gtaaaattagcagaagctttcggtaagaaagaaactagaatataccaaggagaaagagaa
gatgaagaattagcagcaaaaataaatgacttttgttacgacaaatgttatgctatcgct
aaaaaaggaacatctaaagtagaacgtacaactgcatttgctgaagtaaaagaagaatta
aaagcttcttttaccgaagaagaattagcagattatggagatttagttagtaaatacttc
aacaaatctcaaaaagtagctgttagagaattaactttatctgaaggtttacgtttagat
ggaagaaaaacagacgaaattagaccaatttggtgtgaagtagattatttaccatctgtg
catggttcttctatctttactcgtggagaaactcaagctttagcaactgtaactttagga
acatctagagatgcaatgaaaatagatatgccatcttatgaaggtgaagagaacttctat
ttacactataacttccctcctttttgtacaggtgaagctagaccattaagaggaacatct
cgtagagaagttggtcatggtaacttagcacaacgtggtttaaaaggaatgattcccgca
gactgtccttatacagtaagagtagtatctgaagtattagaatctaacggttcttcttct
atggcaactgtttgtgctggtacaatggcgttaatggatgcaggtgttcaaatgataaga
ccagtttctggtattgcaatgggattaatttctgatggagatcgttacgcagttttatct
gatattttaggtgatgaagatcacttaggagatatggactttaaagtaactggtacttca
gaaggaattactgcttgtcaaatggatattaaagtaaaaggattaggatatgagatttta
gtgaatgcactaaaacaagctcgtgaaggtcgtttacatattttaggaaaaataacagat
acaattgcaggtgctaacatagaagttaaagcacatgcacctaaaatggttaatagaaga
atacctaatgaattaattggtgcatttattggaccaggaggtaaaaacattcaagaatta
cagaaagaaacagaaactacaattgtaattactgaagaccctgtaacagaagaaggaatt
attgaaattttaggtactaaaccagaaggaattgaagcagtaattgctaaaattgaatct
atgatgtttaaaccagaaaaaggttctgtgtacgaagtaaaagtaatcaaaatgttagat
tttggtgctgttgtagagtatattgaagctcctggtaacgaagttttacttcacgttagt
gaattagcttgggaacgtacagataatgtttctgatgttgttaagatgggagatatttta
gatgtaaaatactttggtttagacccaagaacacgtaaggaaaaagtttctagaaaagct
attttaccaaaaccagaaggttttgtcgaaagaccacctagagatgataaacgttctggt
ggacgtgataacagaagcagagataatcgcggacgtgatgacagaaaacctagagaacca
agaaaagaagaataa
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