Parachlamydia acanthamoebae: PUV_08280
Help
Entry
PUV_08280 CDS
T01552
Symbol
cshA-A
Name
(GenBank) deAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUV_08280 (cshA-A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puv03019
]
PUV_08280 (cshA-A)
03009 Ribosome biogenesis [BR:
puv03009
]
PUV_08280 (cshA-A)
Enzymes [BR:
puv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUV_08280 (cshA-A)
Messenger RNA biogenesis [BR:
puv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PUV_08280 (cshA-A)
Ribosome biogenesis [BR:
puv03009
]
Prokaryotic type
rRNA helicases
PUV_08280 (cshA-A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCB85778
UniProt:
F8KW77
LinkDB
All DBs
Position
complement(930520..931719)
Genome browser
AA seq
399 aa
AA seq
DB search
MTSFLDFGLDPTILKALEKLKFSEPSPIQKAAIPLILQKKDLIALAKTGSGKTAACAIPI
CDRVDVNSNSVQALIVVPTRELALQYATETQKIGAEKGVKTFALFGGEDAAMQQSKLKHG
VQVLVVTPGRLIDFVYSRQIDLSHVETLILDEADEMLSMGFYDDLEFIIQCLVHEHQTLL
FSATMPKQIRDIAKKHMQSPLEVSLIGEDATPDMIEHHFLYCRYHEKEHNLIELIKTQTP
TKAIIFCSSRQECEKVTYVLRKQLHETIDFLHAGLSQDIRSAVTNKFRTNKIQLLVATDV
VSRGLDFSSVSHVFIYHLADDLDLYIHRSGRTGRYEKAGTVITLVTQRELRTLNRLLKVL
KKEPNWIGPPPPPPSQNTDKTREKKRFYPKRKPANPSSS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgactagttttcttgactttggattagatccaaccattttaaaagctctagaaaaatta
aaattttcagagccctcacctattcaaaaggccgctatcccacttattcttcaaaaaaaa
gacctcatagccttggctaaaaccggttcaggtaagacggcagcctgcgcaatccccatc
tgcgatcgcgtggatgtaaactccaattctgtacaagccctgattgtggtccctacgcgg
gagctggctcttcaatacgcgactgagacgcaaaaaattggagccgaaaaaggagttaaa
actttcgccctgtttggcggcgaggatgcagctatgcaacaatctaaactcaaacatggt
gtgcaagttttagttgtcacacctgggcgtttaatcgactttgtttactccagacaaatc
gaccttagccacgtggagacgctgatcctcgatgaagccgacgaaatgctcagcatgggt
ttctacgatgacttagaattcattatccaatgcttagtccacgagcatcaaacattgctg
ttttcggccacaatgccaaaacaaattcgagatattgccaagaaacatatgcaatctccc
ttagaagtttctttgatcggagaagatgccacacctgatatgatcgagcatcattttctt
tattgccgctatcatgaaaaagaacataatctcattgaactcattaaaacacagaccccc
actaaagcgattattttctgtagttccagacaagaatgtgaaaaagtgacttatgtactc
cgcaagcaactgcatgaaaccattgattttcttcatgctggattaagtcaagatatccgc
tcagctgtaacgaataaatttcgaacaaataaaatccaactgcttgtcgccaccgatgtg
gtttcacgcggactcgatttttcgtcggtttcgcacgtttttatatatcacctggcagat
gatctagacctctatatccatcgctcaggacgaacggggcgctacgaaaaagcagggaca
gtaatcaccctggtaacccaaagagaattgcgcacgctcaatcgacttttaaaagtactc
aaaaaagaaccaaattggattggccctccgccacctcccccttctcaaaatacagataaa
accagagaaaaaaaacgcttttatcctaaaagaaaaccagcaaacccttcttcgagctaa
DBGET
integrated database retrieval system
