Pantoea vagans C9-1: Pvag_0595
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Entry
Pvag_0595 CDS
T01326
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pva
Pantoea vagans C9-1
Pathway
pva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pvag_0595 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_0595 (uvrB)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pvag_0595 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pvag_0595 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
SBDS_domain_II
UB2H
Motif
Other DBs
NCBI-ProteinID:
ADO08797
UniProt:
E1SH56
LinkDB
All DBs
Position
619364..621205
Genome browser
AA seq
613 aa
AA seq
DB search
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIHQRVAINERVLVTVLTKRMAEDLTEYLTEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQQLHNEKNGIVPQGLNKKITDILELG
KNVVKTRGKAKPARPGEAQALADFQLLTPQALQKKIHELEGQMQQHAQNLEFEQAASVRD
QLHELRTLFIAAS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggcaccgaacaaaacgctggcggcgcagctctatggcgagatgaaagagttt
ttcccggataacgccgtcgagtttttcgtctcttactacgactactatcagcctgaagcc
tatgtgccgagctccgacacctttattgaaaaggatgcgtcggtgaatgaacacatcgaa
cagatgcgtctgtcagcgaccaaggcgctgctggagcggcgcgatgttatcgtggtggcg
tcggtttcggcgatctacggtctgggcgatcccgatctctatctgaaaatgatgctgcac
ctgacccgcggcatgattatcgatcagcgcagcatcctgcgccgcctctcagagctgcag
tacacccgcaacgatcaggcgtttcagcgcggcaccttccgcgtgcgtggcgaagtgatc
gatatcttcccggcggagtcggacgatattgcgctgcgcgtcgaactgtttgacgaagag
gttgagcgtctgtcgctgttcgacccgctgaccgggcagatcgattcagtggtgccgcgc
tttaccatttatcccaagacgcactacgtcacgccgcgtgagcgcattctgcaggcgatg
gaagacatcaaagtcgagctggcggatcgccgccgggtgctgctggagaacaataaactg
ctggaagagcagcgtattactcagcgtacccagtttgatctggagatgatgagtgagctg
ggttactgctccggcatcgagaactactcgcgctacctctccgcacgcggaccgggcgaa
gcgccaccgacgctgtttgactatctccctgccgatggcctgctggtggtggatgagtcg
cacgtcaccatcccgcagattggcggcatgtacaaaggggaccgggcgcgcaaagagacg
ctggtggagtatggcttccgcctgccgtcggcgctggacaaccgtccgatgaagtttgaa
gagtttgaggcgctggccccgcagaccatctatgtctcggcaacgccgggcaaatatgag
ctggaaaaatcgggcgacgaagtggtcgatcaggtggtgcgtcctaccggtctgctggat
ccgatcatcgaagtgcgtccggtcggcacccaggttgacgatctgctgtcggaaatccat
cagcgcgtggcgatcaacgaacgtgtgctggtgacggtgctgaccaagcgcatggcggaa
gatctcactgaatatctgacggagcatggcgagaaggtgcgctatctgcactccgacatc
gacaccgtagagcgtatggagattatccgcgacttacgtctgggtgagtttgatgtgctg
gtgggcatcaacttactgcgtgaggggctggatatgccggaagtgtcgctggtggcgatt
ctggatgcggataaagagggcttcctgcgttccgaacgatcgctgattcagaccattggt
cgtgcggcgcgtaacatcaacggtaaagcgattctctatggcgataaaatcacgccgtcg
atggcgcgtgccattgaagagacagagcgccgccgcgagaaacagcagctgcacaacgaa
aagaatggcattgtgccgcagggcctgaacaagaagatcacggatattctggagctgggc
aagaatgtggtgaaaacccgcggcaaagcgaaaccggctcgtcctggcgaggctcaggca
ctggccgatttccagctgttaacgccgcaggcgctgcagaagaaaatccacgagctggaa
gggcagatgcagcagcacgcgcagaacctggagttcgaacaggcggccagcgtgcgcgat
cagctgcatgagctgcgaacgctgtttatcgcggcctcgtag
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