Pantoea vagans C9-1: Pvag_0939
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Entry
Pvag_0939 CDS
T01326
Symbol
ymfC
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pva03009
]
Pvag_0939 (ymfC)
Enzymes [BR:
pva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Pvag_0939 (ymfC)
Ribosome biogenesis [BR:
pva03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pvag_0939 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADO09133
UniProt:
E1SK87
LinkDB
All DBs
Position
complement(987170..987841)
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AA seq
223 aa
AA seq
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MRRMFLTAKPMRKTTQRIHQDKRFSRPTRDARRAPARPAAPRRVILFNKPFDVLPQFTDE
AGRRTLKDFVSVADVYAAGRLDRDSEGLMVLTNDGALQAALTQPGKRTGKVYYVQVEGDP
QEADLQPLRDGVNLKDGMTLPAGVEKVAEPAWLWPRQPPIRERKNIPTQWLKVTLYEGRN
RQVRRMTAHIGFPTLRLIRYAMGSYSLDDLASGMWREISESPT
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgaatgtttctgactgcaaagcccatgcgaaaaacaactcaacgaattcaccag
gataaacgattcagccgcccgacgcgtgatgcgcgacgtgcgcctgcccgccctgctgct
ccacgacgtgtcattctgtttaacaaaccgttcgacgttttgccgcaattcaccgatgaa
gcgggtcgccgcaccctgaaagattttgtcagcgtcgcagacgtttatgccgcgggtcgc
cttgaccgtgacagcgaaggcctgatggtactgaccaacgacggtgctctgcaggccgcg
ctgacgcagcccggcaaacgcaccggcaaggtctattatgtgcaggtggaaggcgatccg
caggaagcggatctgcagcctctgcgggatggggttaatctgaaagatggcatgacgctg
cccgctggcgtggaaaaagtggctgagccggcgtggctctggccgcgtcagccgccaatc
cgcgagcgcaaaaatatcccgacgcagtggctgaaagtcacactgtatgaaggccgtaat
cgtcaggtgcgccgcatgacagcccatattggctttcccaccttacgattaattcgctac
gccatggggagctattcactcgacgatctggcttcgggcatgtggcgtgaaatcagcgag
agccccacctga
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