Planctoellipticum variicoloris: SH412_002759
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Entry
SH412_002759 CDS
T09866
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
pvar
Planctoellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_002759
Transporters [BR:
pvar02000
]
Other transporters
Pores ion channels [TC:
1
]
SH412_002759
BRITE hierarchy
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
WLD12619
LinkDB
All DBs
Position
complement(3587996..3589411)
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AA seq
471 aa
AA seq
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MDIGGVRQFGRVFRQSFRALIGVAAVSGSIAIAQDDAVVATTGAGDYASTAAAPQPQSPP
LPAAYVSPFAGDLWERPVLLGDLGGRRDELLSNGYTFNASATQFYQGVASGGVEQRFQHT
GRLDYVLNVDGAKAGLWQGLFVTLHGETRYGDSINADAGALMPPNVAALFPVPNGTVTAL
TAVKFTQALSENFITFAGKINLLDELVQPFAAGRGVDAFMNTGLAFPVAAARTTPYSTLG
AGFAVLNEMHPVFSMMVLDTHNTPTTSGFENLFDNGATILAKVEVPVSFRDLPGHQGVFG
TYSSGKYNDLQPTAYFDPGNGLMISSGQDTGSWSLFYTADQALYVDPCNAKRSWGLFTNI
GLADDGPSPVRWSANVGLGGSSPIASRELDTFGIGYSYVGYSSPVHNLAPVLLPIRDDHA
VELFYNYAVTSWFRLTPDLQILVPARERTLPPGAEGIDTAVVVGLRAKINF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacattggtggcgtacggcagttcggacgggtctttcggcagtcctttcgagccttg
atcggcgtcgcggcggtctccggatcgattgccatcgcgcaggacgatgccgtcgtcgcg
acgacgggggccggggattacgccagcacggcagcggctccgcagcctcagtcccctccc
ctcccggccgcctacgtctcgcccttcgccggcgatctctgggagcggccggtgctgctg
ggagatctcggcggccggcgggatgagctgttatcgaacggctatacgttcaacgccagc
gcgactcagttctatcaaggagtcgcctcaggcggcgtggaacagcgcttccagcacacg
ggtcgactcgactacgtcctgaacgtggacggcgcaaaggctggactctggcagggcctg
ttcgtcacgctgcacggggaaactcgctacggcgactcgatcaatgcggacgccggggcg
ctgatgccgccgaacgtcgccgctctgttcccagtacccaacgggacggtgaccgccttg
acggcggtgaagttcacccaggccctgtcggagaacttcatcacgttcgccggcaagatc
aacctgctggacgaactggttcaacctttcgccgcaggtcgcggcgtggatgcgttcatg
aatacggggctggcgtttcccgtcgcagccgcgcgaaccacgccctattcgacgctgggg
gcgggatttgccgttctgaacgaaatgcacccggtcttctcgatgatggtcctcgatacg
cataatacgccaacgacatccggctttgagaacctcttcgacaacggcgcaacgatcctt
gcaaaagtcgaagttcccgtttcattccgcgatctgccgggtcaccagggtgtcttcgga
acctacagcagcggcaagtacaacgacctgcagcccacggcgtatttcgatcccgggaat
ggtctgatgatctcgtccggacaggatacggggtcgtggtcgctgttttacaccgcggat
caggcactgtacgtcgatccgtgcaacgccaagcggtcctggggtctgtttacgaatatc
ggactggccgacgacggcccaagccccgtccgctggtccgccaacgtgggcctggggggg
agcagtccgatcgcatcccgcgagctcgatacgttcggaatcgggtattcctacgtcggg
tactcgagccccgtccacaatctggcgccggttcttctgccgatccgcgacgaccacgcg
gtggaactgttctacaactacgccgttacgtcgtggttccgtctgacgcccgatctgcag
attctggtgccggcccgcgaacggacgctgccgccgggtgcggaagggatcgacacggcg
gttgtggtcgggctgcgcgcgaagatcaatttctga
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