Planctoellipticum variicoloris: SH412_002978
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Entry
SH412_002978 CDS
T09866
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
pvar
Planctoellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SH412_002978
BRITE hierarchy
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
HrpB7
TAF
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
WLD12834
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Position
complement(3848970..3850136)
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AA seq
388 aa
AA seq
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MPLNADAVRFWIKRAVQVVVAVAVVAIAGVWYLSPLAVIEHTVEAGEIVAEVMGTGTLEA
RVKSTISPKISGRIHEILVDQGDVVQAGQLLFTLDDAELKQQVEIAEAAVAASQASLARL
QADLDLSQALLKFARLTFERTQQLLQKKVATVEEGEKATESLSVAEAGVSRATAALLEGQ
KQVVETEKTLTYHEARLTDTRVVAPFDGLIVKRYRDPGDIGVPGSAILMLVSTKEIWVSA
WVDETEMSRVRQGQTARVVFRSEGNLDYEGVVSRLGREADRETREFVVDVRVLTLPENWA
VGQRAEVFIEVERKSAVPVLPAKFVVWRDRNAGVYRRNGSAAQWQPVALGLQSAESVEAA
EGLKPGDVVLLPIAGKNISLDGRRVETP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaacgccgatgcggtgcggttttggatcaagagagccgtccaggttgtcgtc
gcggtcgccgtcgtggcgattgccggagtctggtatctctcgccccttgctgtcatcgag
cataccgtcgaagcgggtgagatcgttgccgaagtgatgggcacgggaacgttggaagcc
cgtgtcaaatcgacaatcagccccaagatttccggccgcatccatgagattctggtcgat
cagggggacgtcgttcaggccggccagctcctgttcacactggacgatgccgaactcaag
cagcaagtcgagattgccgaagccgctgtggccgcctcgcaggcgtccctggctcgactt
caggccgatctcgatctgtcgcaggcgttgctgaagttcgcccgactgaccttcgaacgc
acgcagcagctcctccagaagaaggtggcgactgtcgaagagggcgaaaaggcgacggaa
tcattgagtgtcgccgaagcgggcgtatcgcgcgccacggccgcgctcctggaaggtcaa
aagcaggtcgtcgaaaccgaaaagacgcttacgtatcacgaggcgagactgaccgatacg
cgcgtggtcgctcccttcgacggcctgattgtcaaacgctatcgcgatcccggcgacatc
ggcgtgccgggcagcgcaattctcatgctggtctcgacaaaagaaatctgggtcagcgcc
tgggtggatgaaacagaaatgtcccgagtgcggcaaggacagaccgcccgcgtggtcttt
cgatctgaagggaacctcgactatgagggagtggtgtcgcggctcgggcgcgaagcggat
cgagaaacgcgggaatttgtcgtcgatgtccgcgtgctgacgctgccggagaactgggcc
gtcggtcagcgggcggaagttttcatcgaggtcgagcgcaagtccgcagtgccggtgctg
ccggcgaagttcgtggtctggcgcgaccggaacgccggagtctatcgtcgcaacggttct
gctgcacaatggcagccagtcgcgctggggttgcagagtgccgagtcggtcgaggctgcc
gaggggctgaaacccggagacgtggtcttgctgccgatcgctggcaaaaacatctcgctc
gatggccgacgcgtggaaacgccatga
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