Pseudoalteromonas viridis: J5X90_07650 Help Entry J5X90_07650       CDS       T07232                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism pvb  Pseudoalteromonas viridis Pathway pvb02020   Two-component system pvb02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pvb00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     J5X90_07650  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     J5X90_07650  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pvb03021]     J5X90_07650 Transcription machinery [BR:pvb03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      J5X90_07650 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID PaRep2b Motif Other DBs NCBI-ProteinID:  QTL36883 LinkDB All DBs Position 1:complement(1791286..1792794) Genome browser AA seq 502 aa AA seqDB search MRQSLQLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEGESESHDNE TQSKSDTELEQHTTNDNDSFEDSAVSDYEQDSDAALNKDTVSDDLAMDVTWDEYISAAPA SSSGPMPEDETIYQGKTTETLQEYMMWQLELTPFSPTDRAIALAIVEAVDDAGLLTISCE DIVESMNQDNDDEHIELDEVEAVLKRVQLFDPVGIAARSLQECLCIQLNQFDRNTPWLTQ TKEILTEHIDLLASRDYRTLMKKTKLKEADLKEVMTLIHSLNPKPAASIVQEEADYVIPD VSVKKVKGRWVVELNPDSMPKIRVNDHYAAMSRSVKSSTDSQFIRSHLQEAKWFIKSLES RNETLLKVTNCIVQQQQAFFEHGPEAMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRG IYELKYFFSSHVSTENGGECSSTAIRALIKKLIAAENTAKPLSDSKIADVLADQGIKVAR RTIAKYRESLAIPPSNQRKSLI NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt atgaggcaatcgctacagctgcgcatggggcagcaactgacaatgacaccacagctgcaa caggccattcgcctgttacagttgagtacgctagatctccaacaagaaatccaagaagcg cttgatagcaaccctttgttggaagtggaagaaggtgagtctgaatcacatgacaatgaa actcagtccaaatcggatacggagttagaacaacacacgaccaatgataatgacagcttt gaggactcggctgtcagtgactacgaacaagacagcgatgctgcattaaacaaagacaca gtcagtgacgatctggcaatggatgtcacctgggatgagtacatcagtgccgccccggca agcagctctggcccgatgccagaagatgaaaccatctaccagggcaaaaccactgagacg ctgcaagaatatatgatgtggcaactagagctcacgccctttagcccaactgacagagcc atcgctttggcaattgtcgaagccgttgatgatgccggcctgctgacaatcagctgtgaa gacattgtcgagagcatgaaccaggacaatgacgacgaacacatagagctggacgaagtc gaagccgtactgaaacgggtgcaattattcgatcccgttggtattgcggcgcgcagcttg caggaatgtttgtgtatccagctcaaccagtttgatcgcaataccccctggctcactcaa accaaagagatcctgaccgagcacattgatttgctggccagccgcgattaccgcactttg atgaaaaagaccaagctcaaagaggcggatctgaaagaagtaatgaccctgattcacagt ctgaatccgaagcctgccgccagcatagtgcaagaagaagcagactatgtgatcccggac gtgtcggtcaaaaaggtaaaaggccgctgggttgttgagctcaaccctgactccatgcca aaaatcagagtgaacgatcactacgccgctatgtctcgttctgtaaagtcgagcaccgat agccagtttattcgctcgcacctgcaagaggcaaaatggttcatcaagagcttggaaagt cgaaacgaaactttattaaaagttactaattgcattgtgcagcaacaacaggcattcttt gaacatggccccgaggcgatgaagccgatggtactgaatgatgtggccgaaatggtcgac atgcatgagtccacgatttcacgtgtcactacgcaaaagtatatgcacacgccacgcggt atctatgagttgaagtatttcttctcaagccatgtcagcactgaaaacggaggagaatgc tcttcgactgcaatcagagcattgatcaaaaagctaattgccgcagaaaacacagctaag cctttaagtgacagcaaaatagcggatgtattggcagatcaagggatcaaagtggctaga cgtacaattgccaaataccgagagtctttggctatcccaccgtcgaatcagcgtaaaagc ctgatttag

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