Pseudoalteromonas viridis: J5X90_08160
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Entry
J5X90_08160 CDS
T07232
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb01501
beta-Lactam resistance
pvb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5X90_08160
01503 Cationic antimicrobial peptide (CAMP) resistance
J5X90_08160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_08160
01504 Antimicrobial resistance genes [BR:
pvb01504
]
J5X90_08160
Transporters [BR:
pvb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J5X90_08160
Antimicrobial resistance genes [BR:
pvb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J5X90_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QTL36980
LinkDB
All DBs
Position
1:complement(1904777..1907887)
Genome browser
AA seq
1036 aa
AA seq
DB search
MRITDTAVKRPVFAIVINLLLLTFGLVAFTMLPLREYPDIETPIVSVSTDYTGASAEVVE
TKITQVLENRISGIEGIKSITSSSRNGRSNITIEFNIDRNIDAAANDVRERVSRALDRLP
EQVRPPEVSKSNSDESPIAWFVLNSETMDTLQLSDYAQRFIVDRLAVVDGVSNVRIGGER
KYAMKIWLDRRAMAARDITASDIERVLRNENVELPAGEIESLDRDFAVRIARSYKTQQDF
NNLVIKRGAQGYLVRLGEVADVRLEAADVESTFRGNGKNMIGLGIVKQAKANTLDVVDNA
RKELEKIKRNLPEGTTIQDSYDSSVFIRESIVEVYRTLGIAMGLVVLVIFIFLGNIRATL
IPAITVPIALIATFTFLFAMGYSINLLTLLALVLAIGLVVDDAIVMLENIHRRIELGEPR
LLAAYRGAREVGFAIVATTLVLVAVFVPLVFMEGRIGALFTEFALAVSAAVIFSSITALT
LSPALCSKVLKASNKESQFSQWMDRQFGRLESGYRNVISDNINRRYSLTLTLALAGFASF
ALFQQIPSELTPKEDRGTFFIMMNGPEGASYENNAANMAEIEQRLLPYVENEELSRVLVR
VPGWGGRGGVAIVGMPDWDERKRSTWEVMGEISGKMREVTDVRAFAIMRRGIGGGGQSRP
IEFVLQGNDYDELVDWRDRILTRARTNQGLVRLDHDYKETFPQFLISIDKLKAADLGVSV
SDIGRTLETMLGQRRVTTFIDRGEEYDVILKGTKADFSAPNNIADIYVTSRSDQLVPLDS
LITIREEATASRLNRYNRMRAITITANLAPGYTLEQALDFLNQVAAEENDIDGAIDYKGE
SQLFYEGASAMTYVFILALTVTFLVLAAQFESFVHPLVIMLTVPLGLVGAMFGLYATDSS
LNIYSQIGIVMLIGLSAKNGILIVEFANQLRDKGVAFEQAIIDAAVQRLRPIIMTSLTTV
MSAIPLVLASGPGSESRMVIGVVVFAGVSVATILTLFVIPCAYSMLARRTQSPQATSDKL
LEQHDAHPQTQQEREI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcacagatacagccgtaaaacggcccgtttttgctatcgttatcaacctgttg
ctactgacctttgggttagtggcctttaccatgttgccgctgcgcgaatatcccgatatc
gaaacccccatcgtcagtgtcagcaccgattataccggcgcctctgccgaggtcgttgaa
accaagatcacacaagtgctggaaaatcgcatttccgggatcgaagggatcaaaagtatt
acctcatccagccgcaatgggcgctctaatatcaccatagagttcaacattgaccgcaat
attgatgctgccgccaatgatgtacgagagcgcgtatccagggcgctggaccggctgccc
gagcaggttcggccgcctgaagtgtctaagtcaaacagcgacgaaagccccatcgcctgg
ttcgtgctcaacagtgaaactatggataccctgcaattgtccgactatgcccagcgcttt
atcgtcgacagactggcggtggtggatggcgtgtcaaacgtgcgcatcggtggcgagcgt
aaatacgctatgaagatctggctggaccgccgtgccatggcggcccgggacattactgcc
agcgacattgaacgcgtgctgcgcaacgaaaacgttgagctgccggccggtgaaattgaa
tcgctggatcgcgactttgccgtgcgcattgcacgcagttataaaacccagcaagacttt
aataacctggtcatcaaacgtggcgctcagggctatctggttcgactgggcgaggtggcc
gatgtgcgtctggaagcggccgatgtcgaaagtaccttccgcggtaatggcaaaaacatg
ataggcctgggcattgtcaaacaagccaaggccaacaccctggacgtggtcgacaacgcc
cgcaaagagctggaaaaaatcaagcgcaacctgcctgaaggcaccactattcaggacagc
tatgactcatcggtgtttattcgcgagtctatcgtagaagtatatcgcaccctgggcatc
gccatgggtctggtggtactggtgattttcatcttccttggtaatattcgcgctacgctg
atcccggcgatcaccgtgccgattgcactgatcgccacctttacctttttattcgccatg
gggtattccattaacttgctgaccctgctggctctggtgcttgccattggcctggtggtg
gatgatgccattgtgatgctggaaaacatccatcgccgcatcgagctgggcgagccgcga
ctgctggccgcctatcggggcgcacgcgaggtcggctttgccattgtcgccaccacctta
gtgctggtcgcggtttttgtgcctctggtatttatggaaggtcgtatcggtgccttgttt
accgagttcgcactggccgtcagtgccgccgttatcttctccagcatcacggcgctgact
ctgtcaccggccttgtgctccaaagtgctcaaagccagtaataaagaaagccaattctcg
cagtggatggaccgccaatttggccgcctcgaatctggctatcgtaatgtcatcagcgac
aacatcaatcgccgttatagcctgacgctgactctggcactggccggctttgccagcttt
gcgttgttccagcagatcccctcagagctgacacccaaagaagaccggggcaccttcttt
attatgatgaatggtccggagggcgccagctacgagaataacgccgcaaatatggccgag
attgagcaacgcctgctgccctatgtggaaaatgaagaactgagccgggtgctggtacgc
gtaccaggctggggcggtcgtggtggcgtcgccatcgtcggcatgccagactgggatgag
cgcaaacgctcaacctgggaagtcatgggcgagatcagtggaaaaatgcgtgaagtgacc
gacgtgcgtgcctttgccatcatgcgccgcgggatcggcggagggggccagtctcgcccc
atcgagttcgtgctacagggcaatgattacgacgaactggtcgactggcgggatcgcatt
ctgacccgtgcccgcaccaatcagggactggtcaggctcgaccatgactataaagaaacc
ttcccgcaatttttgatcagcatagacaaactcaaggccgccgatcttggtgtctcggtc
agtgatattggccgcaccttagaaaccatgctgggtcagcgccgggtcaccacctttatt
gatcgcggtgaagagtatgatgtgatcctcaaaggcaccaaggccgatttcagtgcacca
aacaatatcgccgatatttatgtcacttcgcgcagcgatcaactggtgccgctggatagc
ctgatcaccattcgcgaagaagccaccgcatcgcgattaaatcgctacaaccggatgcgg
gcaatcaccatcacagccaacctggcgcccggctatacgctggagcaggcgctggatttc
cttaaccaggttgcagcagaggaaaatgatattgatggtgctatcgactataagggcgag
tctcagctgttttacgaaggcgcatcggccatgacctatgtgtttattctggccctaact
gtgacgtttttggtgctggccgcccagtttgagagtttcgtgcacccgctggtgattatg
ctgaccgtaccgcttgggctggttggcgccatgtttggcctgtatgccaccgacagctcg
ctgaatatttacagccagatcgggattgtcatgttgattggcctcagtgccaaaaatggt
attctgatcgttgaatttgctaaccagctcagagacaagggcgtggcctttgagcaggcg
attatcgatgcggcggtacagcgactcaggcccattatcatgacctcactgaccacggta
atgagtgccattccactggtactggcctcgggcccgggctcagagagtcgcatggtgatc
ggggtcgtggtatttgccggggtgagtgtcgcgaccattttaacgctgtttgtgatcccc
tgtgcctacagcatgctcgcaagacgcacgcagtcgccacaggccaccagtgataagctg
cttgagcagcacgatgcccacccgcaaacacaacaggaacgggagatttaa
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integrated database retrieval system
