Pseudoalteromonas viridis: J5X90_16940
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Entry
J5X90_16940 CDS
T07232
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00071
Fatty acid degradation
pvb00280
Valine, leucine and isoleucine degradation
pvb00310
Lysine degradation
pvb00362
Benzoate degradation
pvb00380
Tryptophan metabolism
pvb00410
beta-Alanine metabolism
pvb00640
Propanoate metabolism
pvb00650
Butanoate metabolism
pvb00907
Pinene, camphor and geraniol degradation
pvb00930
Caprolactam degradation
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01200
Carbon metabolism
pvb01212
Fatty acid metabolism
Module
pvb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
J5X90_16940 (fadJ)
00650 Butanoate metabolism
J5X90_16940 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
J5X90_16940 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
J5X90_16940 (fadJ)
00310 Lysine degradation
J5X90_16940 (fadJ)
00380 Tryptophan metabolism
J5X90_16940 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
J5X90_16940 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
J5X90_16940 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
J5X90_16940 (fadJ)
00930 Caprolactam degradation
J5X90_16940 (fadJ)
Enzymes [BR:
pvb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
J5X90_16940 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
J5X90_16940 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
J5X90_16940 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QTL35185
LinkDB
All DBs
Position
1:complement(3861458..3863557)
Genome browser
AA seq
699 aa
AA seq
DB search
MSVFSYELNSHRVAIVTIDVPGEKMNTLRDSFADELLTILEQGRSDDVTGMVFVSGKDDN
FIAGADIKMLDQAKTREDALRLSEMCQQAFFKMQKLPFPTVAAIHGAALGGGLEFALACD
YRVCSDDDKTKLGLPEVQLGLLPGGGGTQRLPKLVGIQKALEWMLTGKQVRAKQAKKAGL
VDDSVPHSILLDVAIKLARGSKPKARKPKLDKLSQLLESNPFGRNIIFKKAQENVEKKTG
GHYPAPLAIIKAVRASVELGELKAYKTEAEGFADLVMTEVSQSLRGIFFATTEMKKEWQS
DDAPKINRAAVLGGGLMGGGIAHVSAVKAGVPVRIKDVAHQGISNALSYSYKILSKKQKK
RILSKADLQLAMNRITGTTDYTGMRHTDIVIEAVFEDLALKQSMVADIERECTEQTIFAS
NTSSLPIAQIAEKAARPENVIGLHYFSPVEKMPLVEIIPHEGTSQETIARTVNFARKQGK
TPIVVKDKAGFYVNRILAPYVNEAANLLLAGEPIEKIDQALVEFGFPVGPLALLDEVGVD
IGSKIAPILEKELGERFKAPDAFARMIDSKRLGRKTGKGFYKYEAKGKKVDESVYDLLGI
TPAPRLNKQEIASRCVAQMLNEAARCLDEGIIDSARDGDIGAIFGIGFPPFLGGPFSYMD
KRGLNKVCSELSTYATDNAVFTPAEPLLAKAEAGEAYYS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatttagttatgaattaaacagccaccgcgtggccatcgtcaccatcgatgtg
ccgggcgagaagatgaacacgctgcgcgacagctttgccgatgaactgttgactatcctg
gagcagggtcgcagtgatgatgtaactggcatggtgtttgtcagcggcaaagacgataac
tttattgccggtgccgacatcaaaatgctggaccaggcaaaaacccgcgaagacgcgctg
cgcttatctgaaatgtgccagcaggcatttttcaaaatgcagaagctgccgttcccaacg
gttgcggccattcatggtgcggcactgggtggcggtcttgaattcgcgctggcgtgtgat
tatcgcgtatgtagtgatgacgataaaaccaaattaggtttgccagaagtacaactgggc
ctgttaccaggcggtggtggcacacaacgcctgccaaaactggtgggtattcaaaaagca
ttagaatggatgctgacgggcaagcaagtgcgtgccaagcaggctaaaaaagccggtctg
gtagacgacagcgtgccgcacagtattttactggatgtggccattaaactggcccgtggc
agcaagcctaaagcacgtaaacctaagctggataagctgagccagctgctggaatcaaat
ccgtttggtcgcaatatcatcttcaaaaaagcgcaggaaaacgttgagaagaaaaccggt
ggtcactatccggcaccactggctattatcaaggccgtacgtgcttcggttgaactgggt
gaactgaaagcctacaaaacagaggccgaagggtttgccgaccttgtgatgaccgaagtg
tcgcagtctttgcgtggcattttcttcgcgaccacagaaatgaaaaaagagtggcaaagc
gacgacgcgcctaagatcaaccgcgcggcggtactgggtggcggcctgatgggcggcggt
attgcccacgtgagtgcggtaaaagccggtgtgcctgtgcgcattaaagatgtggcgcat
caggggatcagcaatgctctaagctacagctacaagatcctgtctaaaaaacagaaaaaa
cgtattctgtctaaggccgatctgcaactggcgatgaaccgcatcacaggtacaaccgat
tacactggcatgcgtcacactgatatcgtgattgaagcggtatttgaagacttggcactg
aaacaaagcatggtggccgacatcgagcgcgaatgtacagagcaaaccatttttgccagt
aacacgtcgtcgttaccgattgcgcagatcgctgaaaaagcagcacgtcctgagaacgtg
attggcctgcattacttctcgccggtcgagaaaatgcctctggttgagatcatcccgcat
gagggtacatcacaagagaccattgcgcgtaccgtgaattttgcgcgcaagcagggcaag
acgcctatcgtggtaaaagacaaagcgggcttctatgtgaaccgtattctggcaccttac
gtgaacgaagcggccaacctgctgctagcgggcgagccaattgaaaagattgatcaggcc
ctggttgagtttggcttcccggttgggcctttggcactgctggacgaagtgggtgtggac
atcggctctaagattgcgcctattcttgaaaaagaactgggtgagcgttttaaagcaccg
gacgcctttgcccgcatgatcgacagtaagcgcctgggtcgtaagaccggcaagggcttc
tacaagtatgaagccaaaggcaagaaagtggacgagtctgtctatgacttgctgggaatt
acaccggcaccacgtctgaacaagcaagaaattgccagccgctgtgtggcgcaaatgctc
aatgaagctgcgcgctgtctggacgaaggtatcattgatagtgcccgtgatggtgacatt
ggtgccatctttggtattggcttcccaccattcttaggtgggccgttcagctatatggac
aaacgtggtctgaacaaagtgtgttcagagctgtctacctatgccaccgacaacgcggtg
tttacaccggcggagccgctgctggctaaagccgaagcgggtgaagcttactacagctaa
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