Pseudoalteromonas viridis: J5X90_20240
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Entry
J5X90_20240 CDS
T07232
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00500
Starch and sucrose metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
J5X90_20240 (glgX)
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
J5X90_20240 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Strep_his_triad
Motif
Other DBs
NCBI-ProteinID:
QTL38074
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All DBs
Position
2:complement(454627..456726)
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AA seq
699 aa
AA seq
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MLTSHRGQPSPLGSSLHDQGVNFAVYAPGAKEVQLCLFDQSGHSEIAKITMYRHEGGLWS
VFVSPLRAGALYGFRAAGRYAPEKGLLFNHHKLLLDPYCKDFHGEFTWSERHFCHLPVGT
LNPSDNAVDMPKSCVTDIEPYEGARPDIPWSKTLVYECHVRGATKQCEFVPKPLRGKFLG
LSHSNFIAHLASLGVTTIELLPCHAFISEQFLTTKGLKNYWGYNSLSFFVPHKEFLVDGN
ISEFQQMVRELHRTGIEVILDVVYNHTAEGGLDGPTLSLKGLNNTGYYRMVGEQAQYIND
TGCGNTLNIDDPYTLKLVMDSLRYWVEFMGVDGFRFDLATILARTEHGFSSQHSFLQAMA
QDPVLSKVKLIAEPWDVGPGGYQLGGFPSPWREWNDKYRDTVRRFWRGDAGTLSELAKRV
HGSHELFEHNQRGPLNSVNFITSHDGFTLADWVSYEQKHNFANGEDNRDGHSENLSFNCG
VEGQTDHQHILALRHQIQKSALITLMMSKGVPMLAAGTEIAHSQQGNNNAYCQDNQINWL
SWPQSISERCSQNRSAKGSWGSDEASTLCALIARLQEIRCQYAIFHHPFFIHTQDERFNI
SWFNKDARPMSEDDWHDSHNKTLIYMLTDTLRKQSLLVILHAGSDDVAVKLPVIAVGVWK
LTLSSAPPTETIEQGHQTQSLSAHSAWVYQSHNEDLKND
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgtcacaccggggtcaaccttcaccactgggcagctcactgcatgatcagggc
gttaactttgctgtctatgcccctggtgcaaaggaggtacagctgtgcctgtttgatcaa
agtggccatagtgaaatagccaagatcactatgtatcgccatgagggtgggctgtggtct
gtgtttgtctcgccactgcgcgctggcgctttgtacggctttcgcgctgcaggccggtat
gcgcccgaaaagggcctattattcaatcatcataagttgctgttagacccttattgcaag
gattttcatggtgaatttacctggagtgaacggcatttttgccatttaccagtaggtaca
cttaatccaagtgacaatgccgtcgatatgcccaaatcttgcgtgacggatattgagcca
tatgaaggcgccaggccggatataccttggtcaaaaaccttagtctatgagtgccacgtc
cgaggtgccacaaaacaatgtgagtttgtgccaaagcccctgcgtggcaagtttctgggt
ctgagtcacagcaactttatagcgcacctggccagtctaggtgtgacaaccattgagtta
ctgccttgtcatgcctttatttcagagcagtttctgacaaccaaggggttgaaaaactac
tggggttataactctttgagtttttttgtaccgcacaaagagtttctggtagacgggaat
attagcgagtttcagcaaatggttcgcgagcttcatcgcaccgggattgaggtgatcctg
gacgttgtctacaaccacactgcggaagggggcctcgatggtcccactttgtcgctcaaa
gggctcaataatacgggttattatcgtatggtcggtgagcaagcccaatatataaacgac
actggttgtggcaacaccctcaatattgacgacccctataccctgaaactggtgatggac
agtctgaggtactgggtcgaatttatgggcgtcgatggctttagatttgacctggcaacc
atactggcccgcactgagcatggctttagttcgcagcacagtttcttacaggcaatggca
caagaccccgtgctgagcaaggttaagctgattgctgagccctgggatgtgggtcccggt
ggttatcagttgggcgggtttccatctccctggcgggagtggaatgacaaataccgggat
acggtaagacgcttttggcgtggtgacgccggtaccttgtctgagcttgcgaaacgcgtt
catggctctcatgaattatttgaacacaatcaacgcgggccactcaattcggtcaacttt
atcaccagccatgatggctttacgcttgccgactgggtgagctatgagcaaaaacacaat
tttgctaatggtgaagacaaccgtgatggccacagtgaaaacctttcatttaactgtggt
gtagagggtcaaaccgatcatcaacacatactggcattaaggcaccaaattcaaaaaagc
gcgctcattacattaatgatgtctaagggggtgcctatgttagcggcgggtacggaaatc
gcgcactcgcaacagggcaataataatgcgtattgtcaggacaatcagattaattggctg
agctggcctcaaagtatttctgagcgttgcagccaaaaccgaagtgcaaaaggtagctgg
gggagtgacgaagcaagtaccttgtgcgccttaattgcacggctgcaggaaatacgctgc
cagtatgcgatatttcatcacccgttttttattcacactcaggatgagcggttcaatatc
agctggttcaacaaagacgcacgtccgatgtcggaggacgactggcacgacagccataat
aaaacgctgatctatatgttgaccgacacgttaagaaagcaaagtctgctggtgatttta
catgccggcagtgatgatgtggcggtgaaactacctgtcatagcggtgggggtctggaaa
ctaacacttagctctgcgccccccacagaaaccatcgaacaaggccaccagacccaatcc
ctgagtgcacacagtgcctgggtatatcaatctcataatgaggatctcaaaaatgactaa
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