Providencia vermicola: G3341_08750
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Entry
G3341_08750 CDS
T06449
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_08750
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
G3341_08750
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
SLFN-g3_helicase
zinc_ribbon_2
AAA_22
AAA_30
zf-ribbon_3
AAA_16
AAA
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QIC15759
UniProt:
A0A8E4A8W5
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All DBs
Position
complement(1959228..1960988)
Genome browser
AA seq
586 aa
AA seq
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MPFVLRPYQQDAVDATIHYFRQHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYRAYGLEADIFAAGLNRKQSHSKVVFGSVQSVARNLESFHDNFSLVIIDECH
RISGNKKSQYQQIINSLSQYNPMLKILGLTATPYRLGSGWIYQYHYHGMVRGDENCFFRE
CIYELPLHYMIKNHFLVPPERLDMPVLQYDFSKVSLSSAGIFNEHELNLSIQKQKRITPK
IVAQIVDYATPRQGCMIFAATVEHAKEVLSYLPQNTAALVTADTPAMEREAIIQQFKNKQ
LHFLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSPNKSQCLILDYAGNP
HDLFRPEVGSSKPNSNSVPVQVFCPLCQFANTFWGKCTEDGQIIEHYGRRCQGWEENALG
HKQQCEFRFRFKQCPHCGAENDIAARRCQKCDEVLSDPDDMLKAALKLKDALILRCGGME
MTTGRDNKGEWLKITYYDEDGTSVSERFRLHTTPQRRAFEHRFLREHLRAPGVPFKWSSA
HDIVTQQSALRYPQFIVARKKESYWEIRQKIFDYQGRFRVADQLYS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgttctccgcccctatcaacaagatgctgtcgatgcgacgattcactacttt
cgccagcacacgcaacctgctgttattgtgctacctacaggcgcaggaaaaagcctagtg
atagccgaacttgctcgcttagctcgaggaagagtgcttgtgttagctcacgtcaaagag
cttgttgaacaaaatcatgctaaatatagggcttatggcctagaagcggatatttttgct
gcgggtttaaatcgtaaacaatcccacagcaaagtggtctttggcagcgtacaatctgtc
gcgcgcaacctagaaagctttcatgacaacttttcactggtcattattgatgagtgccac
cgtattagcggaaataaaaaaagccaataccaacaaattatcaatagccttagccaatat
aatccaatgctaaaaattctagggctgaccgctacgccttatcgactaggttcaggctgg
atttaccaatatcattatcatggcatggtcagaggtgatgaaaattgctttttccgcgaa
tgtatttacgaattaccgttacactatatgattaaaaatcatttcttagtaccgcctgaa
cgtctcgacatgcctgtactgcaatatgattttagcaaggtgtcactcagttccgcgggc
attttcaatgaacatgaactcaatctttctatccaaaaacaaaaacgcattacgccgaag
attgtggctcaaatcgttgactatgcgacaccacgacaaggctgcatgatttttgctgca
actgtcgaacacgcaaaagaggtactcagctatctcccccaaaatactgccgccttagtc
accgcagacacaccggcgatggaacgtgaagcgattatccaacaatttaaaaataaacaa
ttgcattttttagttaacgtctccgtattaacaaccggtttcgatgcccctcatgtggat
gttatcgccattttacgccctactgaatcggtcagtttataccaacagattgttggacgt
ggtttgcgattatcacctaataaatctcagtgtttgattttagactacgcgggtaatcct
catgacttatttcgccctgaagttggttcaagcaaacctaattcgaatagtgtgcctgta
caagttttttgtccactctgtcaatttgcgaatactttttggggaaaatgcacagaagat
ggccaaattattgagcactatggccgccgttgccaaggttgggaagaaaatgcgttagga
cacaagcaacaatgtgaatttcgttttcgttttaagcaatgccctcactgtggagcagaa
aatgatatcgctgcacgacgctgtcaaaaatgtgatgaggtgctatcggatcctgacgat
atgctaaaagccgcattgaaactaaaagatgctttaattttacgttgtggtggaatggag
atgacaacaggtcgcgataataaaggtgaatggttaaaaatcacctattatgatgaggat
ggtacttctgtctcagaacgttttcgccttcatacaacaccacaacgtcgtgcatttgag
catcgtttcttgcgtgaacacttacgagcgcctggcgttcctttcaaatggtcgtcagcc
catgatatcgttacccaacagtccgcattacgatacccgcaatttattgttgctcgtaaa
aaagaaagctattgggagatccgccaaaaaatattcgattatcaaggacgcttccgcgtt
gctgaccaactctattcttga
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