Proteus vulgaris: CRN77_16785
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Entry
CRN77_16785 CDS
T05486
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pvg
Proteus vulgaris
Pathway
pvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRN77_16785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvg03019
]
CRN77_16785
Enzymes [BR:
pvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CRN77_16785
Messenger RNA biogenesis [BR:
pvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRN77_16785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATN01292
LinkDB
All DBs
Position
complement(3654829..3656253)
Genome browser
AA seq
474 aa
AA seq
DB search
MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLSQSATKTKGRQPVRALILTPTRELAAQIAENVKAYSRYIPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSKEITGLANSLLNDPVSISVAPRNSAAESVDQHVHLVDKKRKTELLSHL
IGLENWSQVLIFTRTKHGANKLAEHLNADGIKSAAIHGNKSQGARTRALADFKDGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHDLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKPKNNTPRRSGGGHGRADIRGKDNRNNSRK
DGDSEGKESGRNKSKENYRNRDGSRTGKLGPRRSRKSDEGSDNQSPWSKARKEF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacagcaggcgattgagccgattttggcgggtaaa
gacgtattagcgagtgcgcaaacgggcacaggtaaaacagcagcttttacattaccaata
ttggaaaagctgtctcaatcagcaaccaaaacaaaaggtcgtcaacccgttagagcgctg
attttgacaccaacgcgtgagctagcggctcaaattgctgaaaacgtaaaagcgtatagt
cgttatattccaattcgttcgttagtcgtttttggtggagtaagcattaaccctcaaatg
atgaaattacgcggtggtgttgatgtactgattgcaacaccgggacgtttactcgatctt
gaacatcaaaatgcagttgatctttctcgtgttgaagttttagtgcttgatgaagctgac
cgtatgttagatatgggctttatccacgatattcgccgtgtaattaataaattaccgaaa
aaacgtcaaaatttactattttcagcgacattctctaaagagatcactggtcttgccaat
tcgctattaaatgatccggtgagtatttccgttgcaccaagaaactcagccgcagaatct
gttgatcaacatgtgcatttagttgataaaaagcgtaaaaccgagctgttatcacattta
attggtttagaaaattggtctcaagtgctgattttcacccgtactaaacatggtgcgaat
aaacttgctgaacatttaaatgcagatggtattaaatcagcagccattcacggcaataaa
agccaaggtgcgagaactcgcgcattagctgattttaaagatggtaaattaaaagcatta
gttgcaacagatattgccgctcgtggtcttgatatcgaccaactgccgtatgttgtcaat
tttgaattaccgcaagttgcagaagattatgttcaccgtattggtagaacaggccgcgct
gctgcaacgggtaaggctatttcacttgtctgtgttgatgaacatgatttattagctgat
attgagcgtttattaaaacgtgaaattccacgtttagcgttagaaggttacgatcctgac
ccttcaattaaagcagcgcctttgcataaaaaaccaaagaataatacaccacgtagaagt
ggcggtggtcatggacgtgcagatattcgtggtaaagataatcgcaacaatagtcgtaaa
gacggcgatagcgaaggcaaagagtctggacgtaataaaagcaaagaaaactaccgtaat
agagatggctctcgtaccggaaaattagggcctcgtcgttcacgtaaaagtgatgaaggt
agtgataatcaaagcccttggtcaaaagctagaaaagagttttga
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