Panicum virgatum (switchgrass): 120640514
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Entry
120640514 CDS
T07260
Name
(RefSeq) cysteine proteinase 1-like
KO
K01373
cathepsin F [EC:
3.4.22.41
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120640514
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120640514
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.41 cathepsin F
120640514
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C1: papain family
120640514
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GFIT
Motif
Pfam:
Peptidase_C1
Inhibitor_I29
Peptidase_C1_2
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120640514
NCBI-ProteinID:
XP_039772311
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Position
7K:21379267..21382026
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AA seq
386 aa
AA seq
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MARRGLRPLAAAALLLLVVALFSAAALCSAEPEDAASAAEDPLIEQVVGADDDELELDAE
AHFASFVRRFGKSYRDEDERARRMAVFRANLRRARRHQRLDPTAAHGVTKFSDLTPTEFR
RQFLGLRRSSARDLLKGSSAHKAPILPTDGLPADFDWREHGAVGPVKNQGSCGSCWSFST
SGALEGAHYLATGKLEVLSEQQMVDCDHECDASDPRSCDAGCNGGLMTTAFSYLEKVGGL
ESEKDYPYTGSDGTCKFDKSKIVAQVKNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQT
YIGGVSCPYICGKHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGENGYYKICR
GPHVKNTCGVDSMVSTVTAIHTSKKE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgcggcctccgccccctcgccgccgccgcgctcctcctcctcgtcgtcgcc
ctcttctccgccgccgcgctctgctcggcggagcccgaggacgccgcctccgccgcggag
gacccgctcatcgagcaggtggtcggggcggacgacgacgagctggagctggacgcggag
gcgcacttcgccagcttcgtccgccggttcggcaagtcgtaccgcgatgaggacgagcgc
gcgcgccgcatggccgtgttcagggccaacctccgccgcgcgcggcgccaccagcggctc
gaccccacggcggcacacggggtcaccaagttctccgacctcaccccgaccgagttccgc
cgccagttcctcggcctccgccgctcctccgcccgggacctgctcaaggggtcgtccgcg
cacaaggcgcccatcctccccaccgacggcctcccggccgacttcgactggcgcgaacac
ggcgccgtcgggcccgtcaagaaccagggctcgtgcgggtcgtgctggtccttcagcacg
tcgggggcgctggagggggcgcactacctcgccaccggcaagctcgaggtgctcagcgag
cagcagatggtcgactgcgaccatgagtgcgatgcatcagacccacgctcatgcgatgca
ggatgcaatggtggcttgatgactacagctttcagctatctcgagaaagttggtggccta
gagagtgagaaagattacccttacactgggagtgatggcacctgcaagtttgacaagtcc
aaaattgtagctcaagtgaagaacttcagcgttgtatctgtggatgaagaccaaattgct
gctaatttggttaaacatggtccactcgcaatcggtatcaatgccgtattcatgcagaca
tacatcgggggtgtctcgtgcccatacatttgtggaaagcatcttgaccatggtgttctc
ctagttggctacggatctgctggatatgcaccaatccgcttcaaggaaaagccctactgg
atcatcaagaactcctggggtgagaactggggtgagaacggttattacaagatctgcagg
ggtccgcatgtgaaaaacacatgcggtgttgattcgatggtttctactgtcactgccatc
cacacctctaagaaggaatag
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