Panicum virgatum (switchgrass): 120641272
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Entry
120641272 CDS
T07260
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120641272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120641272
04147 Exosome [BR:
pvir04147
]
120641272
04090 CD molecules [BR:
pvir04090
]
120641272
Enzymes [BR:
pvir01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120641272
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120641272
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120641272
CD molecules [BR:
pvir04090
]
Proteins
120641272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
ABC_ATPase
AAA_30
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_5
APS_kinase
AAA_24
SbcC_Walker_B
AAA_15
SRP54
Cytidylate_kin
nSTAND1
P-loop_TraG
CoaE
AAA_33
Motif
Other DBs
NCBI-GeneID:
120641272
NCBI-ProteinID:
XP_039773251
LinkDB
All DBs
Position
7K:36927365..36932147
Genome browser
AA seq
1264 aa
AA seq
DB search
MAAAGAEGKASLLELVRYADARDRCLMALGALGSFGDGMMQPLSMLVLADIVNSYGGAGT
AGSALSSAAVDKFALRLLYVAVAVGACAFLEGLCWTRTAERQASRMRRLYLEAVLRQQVE
FFDAPAAPSSSQGATTFRVISTISDDADTIQDFLAEKLPNVLANMTLFFGGLAVAFVFAW
RLALAGLPFTALFVAPSLVLGKRLAAAAGEARAAYEEAGGVAEQAVASIRTVASCRAERR
TLERFGRALARSTALGVKQGLIKGAVIGSMGVIYAVWSFLSWLGSVLVIRFHAQGGHVFV
ASICIVLSGMSIMMALPNLRYFVDAATAAARMREMIDRLQPLKGEGKKGATRESVRGQIV
FRDVRFSYPSRPDTRVLDGVSLTVAAGATVGLVGGSGSGKSTVISLLQRFYSPDSGEILL
DGYDIAALNAEWLRSQIGLVSQEPVLFATSIRENILFGDEAASLKLVVAAAKMANAHDFI
IKLPHGYETNVGQFGTQLSGGQKQRIAIARALIRHPRILLLDEATSALDSESERAVQDAL
DRASVGRTTVVVAHRLSTIRKADMIAVLDAGRVVERGTHDELVAAAGMDGGGGGGVYARM
ARLQNASVAVAREEQRQRAVEVESDSSMVSFRSVEIMSLPSDFHPSPAPSFRSVERSVDM
EDDELAGHDTARRRKPSQLRLLKMNRPEWKQALLGCAGAVVFGAVLPLYSYSLGSLPEVY
FLGDNDLIRSKTRLYSLVFFGIAVVCITSNIVQHYNFAVMGERLTERVRAQMLAKILSFE
VGWFDEKENSSAAVSARLATQATKVRSLVGDRMCLLLQAAANAALGFSLALAVSWRLAVV
MMAIQPLIIASFYFKKVVMSAMSRKAKKAQVRGSQLAGEAVVNHRTITAFSSQRRMLRLY
EAAQEGPRKDSRAQSWISGACLSLCQFSNTATMALALWYGGRLMARGLITPTHLFQVFFM
LMTMGRVIADAGSLTSDLAKGGDAVRSVLDTLDREPLIKDDGDSKQKRQEIKGAIAFRNV
HFSYPTRPEVAVLDGFTLEIGAGKTVALVGPSGSGKSTVIALIERFYDAQKGSVLVDGRD
IRSYSLAHLRSHIALVSQEPALFSGTIRDNIAYGEEHATEDEVTAAAKLANAHEFISGME
GGYDARVGERGAQLSGGQRQRIALARAVLKNARVLLLDEATSALDTVSERLVQDAVERML
RGRTCVVVAHRLATVQKADTIAVVKDGKVAERGRHGELIAAGRGGTYYNLIKLQHGRSPC
LSPM
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccggggccgaggggaaggcgtcgctcctggagctggtgcgctacgccgac
gcgcgggaccggtgcctcatggcgctcggcgcgctgggcagcttcggcgacggcatgatg
cagccgctctccatgctcgtgctcgccgacatcgtcaacagctacggcggcgccgggacc
gccggcagcgcgctcagctccgccgccgtcgacaagttcgcgctccggctgctgtacgtc
gcggtcgcggtgggcgcctgcgcgtttctagaggggctgtgctggacgcggacggcggag
cggcaggcgtcgaggatgcggcgcctctacctggaggccgtcctgcgtcagcaggtggag
ttcttcgacgcgcccgcggcgccgtcgtcctcgcagggcgccaccacgttccgcgtcatc
tccaccatctccgacgacgcagacaccatccaggacttcctcgccgagaagctgccgaac
gtcttggccaacatgacgctcttcttcggcgggctggccgtcgccttcgtcttcgcgtgg
cggctggcgctggcgggcctcccgttcacggcccttttcgtggccccgagcttggtcctc
ggcaagcggctcgccgccgcggccggggaggcccgcgcggcgtacgaggaggccggcggc
gtcgccgagcaggccgtggcgtccatccggaccgtggcgtcgtgccgcgcggagcgccgg
actctggagcggttcgggcgcgcgctggcgcggagcacggcgctcggcgtcaagcagggg
ctcatcaagggcgccgtcatcgggagcatgggggtcatctacgccgtctggtccttcctg
tcctggctcggcagcgtcctcgtcatccgcttccacgcgcagggcggccacgtcttcgtc
gcctccatctgcatcgtcctctccggaatgtccatcatgatggcgctgccgaacctgcgc
tacttcgtcgacgccgcgacggcggcggcgcggatgcgcgagatgatcgacaggctccag
cctctgaagggggagggcaagaagggcgccaccagggagagcgtcaggggccagatcgtg
ttcagggacgtgcgcttctcatacccgtcgaggccggacacgcgggtgctcgacggcgtg
agcctgacggtcgcggcgggcgccaccgtcggcctcgtcggcggcagcggctctggcaag
tccaccgtcatctccctgctgcagaggttctacagccccgactccggcgagatactgctg
gacggctacgacatcgccgcgctcaacgcggagtggctccggagccagatcgggctggtg
agccaggagcccgtgctgttcgccacctccatcagggagaacattctgttcggcgacgag
gcggcgtcgcttaagctggtcgtcgccgcggcgaagatggccaacgcacacgacttcatc
atcaaattgccccatgggtatgaaacaaatgtcgggcagttcgggacgcagctgtcaggc
gggcagaagcagcgcatcgccatcgcccgcgccctcatccggcaccccaggatcctgctc
ctggacgaggcgaccagcgcgctggactcggagtcggagcgcgcggtgcaggacgcgctg
gaccgggcgtccgtggggcggacgaccgtcgtcgtggcgcaccgcctgtccacgatccgc
aaggccgacatgatcgcggtgctcgacgccggccgcgtggtggagcgcggcacgcacgac
gagctcgtcgccgccgctggcatggacggcggcggcggcggcggcgtctacgcccggatg
gcgcgcctgcagaacgcgtccgtggccgtggcgagagaggagcagcgccagcgcgcggtg
gaagtcgagtcggacagcagcatggtgtcgttccgcagtgtcgagatcatgtcgctgccc
agcgacttccatccaagcccggcgccgtcgttccggtcggtcgaacgctccgtggacatg
gaagacgacgagctcgccggccacgacaccgctcgccgccgcaagccctcgcagctccgc
ctgctcaagatgaatcggccggagtggaagcaggctcttctcgggtgcgccggcgctgtc
gtattcggcgccgtgctgccgctgtactcgtacagcctcggctcgttgccggaggtgtac
ttcctcggtgacaatgacctcatccgctcgaagaccaggttgtactcccttgtcttcttc
ggcatcgccgtcgtctgcatcacgtcgaacatcgtgcagcactacaactttgccgtcatg
ggcgagcgcctgaccgagcgcgtccgggcacagatgctcgccaagatcctgtccttcgag
gtcgggtggttcgacgagaaggagaactcgagcgcggcggtcagcgcgcgtctggccacg
caggcgaccaaggtccggtccctcgtcggcgaccgcatgtgcctcctgttgcaggcggcc
gccaacgcggcgctgggcttctccctggcgctcgccgtgtcgtggcggctcgccgtcgtc
atgatggcgatacagccgctgatcatcgcgagcttctacttcaagaaggtggtcatgtcg
gccatgtccaggaaggccaagaaggcgcaggtgcgggggagccagctcgcgggcgaggcc
gtggtgaaccaccggaccatcaccgccttctcgtcgcagcggcggatgctccgcctgtac
gaggccgcgcaggaggggcccaggaaggacagcagggcgcagtcgtggatctccggcgcc
tgcctctccctgtgccagttcagcaacacggccaccatggcgctcgcgctgtggtacggc
ggcaggctcatggccagggggctcatcacgcccacgcacctgttccaggtgttcttcatg
ctcatgaccatgggaagggtgatcgccgacgccgggagcctgacctccgacctagccaag
ggcggcgacgccgtgcggtccgtcctcgacacgctggaccgcgagccgttgatcaaggac
gacggcgacagcaaacagaagcggcaggagatcaaaggcgccatcgcgttcaggaacgtg
cacttcagctacccgacccggccggaggtggccgtgctcgacgggttcaccctggagata
ggcgccgggaagacggtggcgctcgtcgggccgagcgggtcaggcaagtccacggtgatc
gccctgatcgagcgcttctacgacgcgcagaagggctcggtcctggtcgacggccgggac
atcaggagctacagcctggcgcacctccgctcgcacatcgcgctcgtcagccaggagccg
gcgctcttctccggcaccatccgcgacaacatcgcgtacggcgaggagcacgccaccgag
gacgaggtcaccgccgccgccaagctcgccaacgcccacgagttcatcagcgggatggag
ggcggctacgacgcgcgcgtcggggagcgaggggcgcagctgtcgggcgggcagcggcag
cggatcgcgctggcgcgggcggtgctcaagaacgcgagggtgctgctgctggacgaggcg
acgagcgcgctggacaccgtgtcggagcggctggtgcaggacgccgtggagcggatgctg
cgggggaggacgtgcgtggtcgtggcgcaccgcctcgccacggtgcagaaggcggacacg
atcgcggtggtgaaggacgggaaggtggcggagagagggcgccacggcgagctcatcgcc
gccggccgcggagggacgtactacaacctgatcaagctgcagcacggcaggtcaccctgc
cttagtccaatgtaa
DBGET
integrated database retrieval system
