Panicum virgatum (switchgrass): 120643798
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Entry
120643798 CDS
T07260
Name
(RefSeq) protein TPLATE-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
Coatamer_beta_C
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
120643798
NCBI-ProteinID:
XP_039776202
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Position
8K:complement(7820838..7831201)
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AA seq
1154 aa
AA seq
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MDLLIAQITTDLRSSDALRQSSALLQALQQCAAGRDVSALARTAATEILSAPSSAVCKRL
ALDLLRALPLPPDLLDPLLLTSLRSDLSFPDPDVAASSIASFPSLPSHLLPSLLSSAHAD
IAAALSSPAESLRLAAVTSLSSLLPRDDLALMCSTNPSLMAHATTWWGRLAELALDSADA
VSAGAFEALARLFQELEGRRMSRLAGDKLVDGEGALAVRAQWAADAIDFIWSRRNMLIAR
TMVMPVESFRVTVYPLVHAAKMVASGVVNTLRRIAKPGDTTIADSVESSAEKLVGVSDIV
SHLLPFLSSLDPPLVFEVGINMLALADVPGGKPEWASAAIIAILTLWDRQEFSSMRETIV
RAVVTNLHLLDLGMQVSLFKRLLQMVRNLRAESDRMHALACICRTALCVDLFAKESVRRG
QKPVPGTDVISLFEDVRVKEDLNSVTSKNLFREELVASLVESCFQLSLPLPELKNSGTES
RVIGALAYGTGYGALNWTEPALDVVEVCRPCVLWDCNGRTYAIDCYLKLLVRLCHIYDTR
GGVKTIKAGASQDQILNETRLRNLQLQLIRDLREIHTPRISSRLIWAISEHFDLEGLDPL
LADDPEDPLNIIISNMHKILFNTDSSATTSNRIQDVQAVLICAQRLGARNARAGQLLSKE
LEEFRASTSADSVTKHQSRYVLQVIKYVTNHPDNRWVGVGDATGDYPFSHHTLTVQFSEA
SAAQDRKLEGLVHKAIRELWRPNPSQLTLLQTKGIGALHKEHPKACTLTGSSDPCYIEAY
HLADPTDGRITLHLKILNLTELELNRVDIRVGLSGALYYMDGFSRTVRHLRNLVSQDPVQ
SSVTVGVSHFERCSLWVQVLYYPFYGSGGSADYEGDYAEEDSQMMRQKRSLRPELGEPVV
LRCQPYKIPLAELLLPLECSPVEYFRLWPSLPAMVECTGTYTYEGSGFKATAAQQYDSSP
FLSGLKSISSKPFHQVCSHFIRTVAGFQLCYAAKTWFGGFVGMMIFGASEVSRNVDLGDE
TTTMICKFVVRASDESITREIESDLQGWLDDITDGAVEYMPEDEVKSAAAERLKISMERI
ALLKAAKPKVPPAKTEQEEEEERKQSEELDGFGNPKGPSTLSKLTAEEAEHRALQAAVLQ
EWHQLCKEKAMKAQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggacctcctcatcgcgcagatcaccaccgacctccgctcctcggacgcgctccggcag
tcctccgcgctgctgcaggccctgcagcagtgcgccgcggggcgcgacgtctccgcgctc
gcccgcaccgccgccaccgagatcctctcggcgccctcctccgccgtctgcaagcgcctc
gcgctcgacctcctccgcgcgctcccgctcccgcccgacctcctcgacccgctcctcctc
acctccctccgctccgacctctccttcccggaccccgacgtcgccgcctcctccatcgcc
tccttcccctcgctgccctcccacctgctcccgtcgctcctctcctccgcccacgccgac
atcgccgccgcgctctcctcgcccgcggagtcgctgcgcctcgccgccgtcacatctctg
tcctccctcctcccgcgcgacgacctcgcgctcatgtgctccacgaacccctccctcatg
gcgcacgccaccacgtggtggggccgcctcgccgagctcgcgctggactctgcagacgcg
gtttccgccggcgcgttcgaggccctcgcgcggctgttccaggagctagaggggcgccgc
atgagccggcttgctggcgacaagcttgttgatggagaaggtgcgcttgcagtgcgtgcc
cagtgggcggctgatgccatcgacttcatttggtccaggcgcaacatgctgattgctcgc
accatggtgatgcctgtggagagcttccgtgtcaccgtgtaccctctggtgcacgcagct
aaaatggttgcttcaggtgtggtaaacacgttgcggcggattgccaagccaggggacact
acgatagctgatagcgtggagtcaagtgcggagaaattggtgggggtatcagacatcgtc
tctcacttgctgccattccttagctcacttgatccaccactggtgtttgaggtggggatc
aatatgctggcgctcgcagatgtgcctgggggcaagccagagtgggcttcagctgccatt
attgcaatcctgacactatgggaccgacaagagttctcgtcaatgagggagactattgtc
agggctgttgtgaccaatctccatttgctggatcttggaatgcaggtctctctcttcaaa
agattgcttcagatggtgagaaacttgagagcagagtcagatcgtatgcatgcattggca
tgtatatgtcggactgctctctgtgttgatctttttgcaaaggagagtgttcgaagaggt
cagaagcctgttccaggaacagatgtgatatcgctttttgaggatgtgagggttaaggaa
gatctaaatagcgtaacaagtaaaaacttgttccgagaagagctggtggcctccctggtt
gaaagttgtttccagctatctcttccactacctgagttgaagaattctgggacagagagc
agagttataggagcgttagcctatggaactggttatggtgctctgaattggactgaacct
gctttggatgtggtggaagtttgcaggccatgtgttctttgggactgcaatggtcgtacc
tatgcaatcgactgctatctaaagttgcttgtaaggctttgtcatatatatgacactaga
ggtggtgtgaagacaattaaagctggtgcatctcaagatcagattctgaatgagacacga
cttagaaatttgcagctacaacttatcagggatcttcgtgagattcatactccacgaata
tcttcacgcttgatatgggcaatttctgaacactttgatcttgaaggtctggatcccctt
ttagctgatgacccagaggatccgctgaatattatcatatctaacatgcataagatatta
ttcaataccgattcatctgctactacatcaaataggatacaagatgtgcaggctgtccta
atatgtgctcaacgtttgggggcaagaaatgcaagagcaggccaacttctcagtaaagag
ctggaagaatttagggcaagtacttcagccgattctgtcaccaagcatcaatcacgttat
gtcttgcaagtaataaaatatgtaacaaaccatccagacaacaggtgggttggtgtgggt
gatgctacaggggattatccatttagccaccacacgcttactgttcaattttcagaggca
tctgctgcccaagacaggaaattggagggattagttcataaggccattcgggaactgtgg
aggccgaatcctagtcagttaactctcctacaaacaaagggaattggtgccttgcataaa
gagcatccaaaagcttgtactttgactggcagcagtgatccgtgctacattgaagcatat
catttggcagatccaactgatggcagaatcaccctacacctgaagattttaaatttgact
gaactggaactcaacagagtggacatccgtgttggcctttctggagcactgtactatatg
gatggcttctctcgcactgttcggcaccttcggaatcttgtttcccaggatccagtccaa
agtagtgtaactgtaggagtttcacattttgagagatgctcactctgggttcaagtcttg
tattacccattttacggaagtgggggatctgcggactacgaaggagattatgcagaagag
gattcacagatgatgaggcagaagcgctcacttcggcctgagcttggggaaccagttgtt
ttgcggtgccaaccgtacaagatccctcttgctgagcttctactaccgttggaatgctct
ccagtcgagtatttccggctatggcctagcctgccagccatggtggagtgcaccggcaca
tacacatatgaaggcagtggtttcaaggccactgctgctcagcagtacgacagctctccc
ttcctcagtggattgaagtcaatttcttctaagccgttccatcaagtatgctctcatttc
atccgaacagtggctggattccagttgtgttatgctgcaaaaacttggtttggtgggttc
gtgggcatgatgatctttggtgcaagtgaagtcagccggaatgtcgacctgggcgacgag
accaccacaatgatctgcaaatttgttgtgcgtgcatcagatgaatccatcacaagagag
atcgaatctgatctccagggctggctggatgatatcaccgacggcgccgtggaatacatg
cccgaggatgaggtgaagagcgcggcggcagagcggctgaagatctccatggagaggatc
gcccttctcaaggcagccaagccgaaggtcccgccagccaagaccgagcaagaggaggaa
gaggagcggaagcagagcgaggagctggacgggttcgggaaccccaagggcccctcgaca
ctctccaagctcaccgcagaggaagccgagcaccgcgccctccaggccgccgtgctgcag
gagtggcatcagctgtgcaaggagaaagccatgaaagcgcagtga
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