Panicum virgatum (switchgrass): 120646833
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Entry
120646833 CDS
T07260
Name
(RefSeq) beta-hexosaminidase 2-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00513
Various types of N-glycan biosynthesis
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir00531
Glycosaminoglycan degradation
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir00604
Glycosphingolipid biosynthesis - ganglio series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120646833
09103 Lipid metabolism
00600 Sphingolipid metabolism
120646833
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
120646833
00531 Glycosaminoglycan degradation
120646833
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120646833
00604 Glycosphingolipid biosynthesis - ganglio series
120646833
00511 Other glycan degradation
120646833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120646833
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120646833
Chaperones and folding catalysts [BR:
pvir03110
]
Intramolecular chaperones
Others
120646833
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
120646833
NCBI-ProteinID:
XP_039779256
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All DBs
Position
9K:62828929..62831450
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AA seq
598 aa
AA seq
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MAASPYLLLLLLLVHPAAAPASRELPPSQPPPPRPPQKVQVWPKPVTVSWPTAVYAPLAP
SFSIRASPSQPSLRHAIAYYGRLIRSERHAPIVPPANYTLSRVPIGLLALSVSDPDLPLG
PGVDESYTLSVPPNSGSADISAATTWGAIRGLETFSQLSWAGGGAAAGGQPIVPCDIEIS
DHPLFTHRGILLDTARNYYPVRDILRTIRAMAFNKLNVFHWHITDSQSFPLVLPSVPNLA
NFGSYSPEMRYTDQDVRRVVRFAEAFGIRVIPEIDMPGHAGSWAGAYPEIVTCANKFWAP
AAKPALAAEPGTGQLNPLNPKTYRVAQDVLRDLAVLFPDPYLHGGADEVNTACWEDDPVV
RRFLADGGSHDRLLELFVNATRPFLVNELNRTVVYWEDVLLGPKVSVGQTVLPRDTTVLQ
TWNNGADNTKRIVAAGYRAIVSSASYYYLDCGHGGWVGNDSRYDVQDKEREGTPLFNDPG
GTGGSWCAPFKTWQRIYDYDILHGLTEDEATRVLGGEVALWSEQSDAVVLDARLWPRAAA
AAETLWSGNKGANGRKRYANATARLNEWRYRMVARGIRAEPIQPLWCPLHPRMCHLSE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgccgtatctcctcctcctcctgctgctcgtccatccagcagccgcaccc
gcctcccgcgagctgccgccttcgcagccgccaccgccgcggccgcctcagaaggtgcag
gtgtggcccaagccggtgaccgtctcgtggccgacggcggtgtacgcgccgctggccccg
tcgttcagcatccgcgcctcgccgtcgcaaccgtcgctccgccacgccatcgcctactac
ggccgcctcatccgcagcgagcgccacgcgccgattgtgccccccgccaactacaccctc
tcccgcgtccccatcggcctgctcgcgctctccgtctccgaccccgacctcccgctcggc
cccggcgtcgacgagtcctacacgctctccgtgccccccaactccggctccgccgacatc
tccgccgccacgacatggggcgccatccgtggcctcgagaccttctcccagctgtcctgg
gcgggcggcggcgccgccgcgggcggccagccgatcgtcccctgcgacatcgagatctcc
gaccaccccctcttcacccaccgcggcatcctcctcgacaccgcccggaactactacccc
gtccgcgacatccttcgcaccatccgcgccatggccttcaacaagctcaacgtgttccac
tggcacatcaccgactcccagtcgttccccctcgtcctcccctccgtccccaatctcgcc
aatttcggttcctactcccccgaaatgcgctacacggaccaggacgtccgccgcgtcgtc
cgcttcgccgaggccttcggcatccgcgtcatccccgagatcgacatgcccgggcacgcg
gggtcgtgggcgggcgcgtacccggagatcgtgacctgcgccaacaagttctgggccccg
gcggcgaagccggccctggcggcggagcccggcacggggcagctgaacccgctcaacccc
aagacgtaccgcgtggcgcaggacgtgctgcgcgacctggcggtgctgttcccggacccg
tacctccacggcggcgcggacgaggtgaacacggcgtgctgggaggacgaccccgtggtg
cggcgcttcctggcggacggcggctcccacgaccggctgctggagctgttcgtgaacgcg
acgcggccgttcctggtgaacgagctcaaccgcacggtggtatactgggaggacgtcctc
ctggggcccaaggtgtcggtggggcagacggtgctcccccgcgacaccaccgtgctgcag
acctggaacaacggcgccgacaacaccaagcgcatcgtggccgccggctaccgcgccatc
gtctcctccgcgtcctactactacctggactgcgggcacggcgggtgggtcggcaacgac
agccggtacgacgtgcaggacaaggagcgcgagggcacgccgctgttcaacgaccccggc
ggcacgggcgggtcctggtgcgcgcccttcaagacgtggcagcgcatctacgactacgac
atcctgcacgggctcacggaggacgaggccacgcgggtgctcggcggcgaggtggcgctg
tggtcggagcagtcggacgccgtcgtgctggacgccaggctctggcccagggccgccgcc
gccgccgagacgctctggtccgggaacaagggcgccaacgggaggaagcgctacgccaac
gccacggcccggctcaacgagtggaggtaccgaatggtggcgcgcggcatccgcgccgag
ccgatccagccgctatggtgcccgctgcacccgcgcatgtgccacctctcggagtag
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